Epinephelus lanceolatus (giant grouper): 117254784
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Entry
117254784 CDS
T07331
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117254784
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ely03310
]
117254784
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117254784
Nuclear receptors [BR:
ely03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117254784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117254784
NCBI-ProteinID:
XP_033479080
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All DBs
Position
1:complement(10541530..10702047)
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AA seq
490 aa
AA seq
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MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCV
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQRPLL
LSHPSLGSPSPGEAERLSPHYSLSSTGLTELPDELGGYMEQNSPEGGSVSSKADSGGGGE
GGGEGRGFYLDVQPSPDQSGLDINGIKPEPLCDYGSSNGFFPYCSFSDGDTSPTLSMAEL
DHLAQLISKSHLETCQYLREELQQMSWQNFLQDEVESYQSKPQEVMWQLCAVKITEAIQY
VVEFAKRIDGFMDLCQNDQIVLLKAGSLEVVLVRMCRLFDSQNNTVYFDGKFAGPDVFKA
LGCDDLITSVFDFAKSMCSLHLSEEELALFSAFILLSADRSWLQEKLQVEKLQQKTQLAL
QHVLQKNQREDGALNKLRCKVSALRSLCSRHTEKLSAFRAVYPDIVRTHFPPLYKELFGA
DLELTLQSDD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgccatgaaagctcagattgaaatcattccctgtaagatctgt
ggagataaatcatcagggatccactacggagtgatcacctgtgagggctgtaagggtttc
ttcaggcggagtcagcagagcaacgccacctactcgtgtcctcgccagaaaaactgtgtg
atcgaccgaacgagccgcaaccgctgccagcactgccgtctgcagaaatgtctggctgtg
ggcatgtcccgagacgctgtcaagtttggtcgcatgtccaagaagcagagggacagtttg
tatgctgaggtgcaaaaacatcgcctccagcagcagcagcagcagcagcggcccctcctt
ctgtctcaccccagcctcggcagcccgagcccgggcgaggctgagcggctgtcccctcac
tacagcctctcctccacaggcctcacggagctgccggatgagctggggggctacatggaa
caaaactcgcctgagggaggatcagtatcgtccaaggcagactctggaggaggaggagaa
ggaggaggagaaggtcgggggttctacctggacgttcagccatcccctgaccagtccgga
cttgatattaatggcatcaaaccagaaccgctgtgtgactacggatccagtaatggcttc
ttcccatactgctccttcagcgacggagacacatcacccaccttgtccatggctgaactt
gatcacctagctcagctcatctcaaagtctcacctggagacgtgtcagtacctgagggag
gagctgcagcagatgagttggcagaacttcctccaggacgaggtggagagctaccagagc
aagccacaggaggtgatgtggcagctctgtgctgtaaagatcactgaggccatacagtac
gtggtggagtttgccaaacgcatcgatggattcatggatctctgtcaaaatgaccagatt
gtgctgctaaaagctggctctttggaagtggtcttggtccgaatgtgtcgactgtttgac
tcgcagaacaacactgtctactttgacggcaagtttgcaggtcctgacgtcttcaaagca
ttaggttgtgatgacttgatcacatcagtgtttgactttgcgaaaagcatgtgttcgctg
catctgtcggaagaggagctcgctctgttttcagcattcatcctgctgtctgcagaccga
tcatggctgcaggagaagctacaggtggagaagctgcagcagaagactcaactggctctt
caacatgtcctgcagaagaaccagagagaggacggagcactaaacaagctcagatgtaag
gtgtcagcattgcgttcactgtgcagccgacacacagagaagctgtcagcattcagagcc
gtttaccctgacatcgttcggacacactttcctcctctgtataaggagctgtttggtgcc
gacctggagctgactctgcagagcgatgattaa
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