Epinephelus lanceolatus (giant grouper): 117254835
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Entry
117254835 CDS
T07331
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117254835 (tmc5)
03037 Cilium and associated proteins [BR:
ely03037
]
117254835 (tmc5)
Transporters [BR:
ely02000
]
Other transporters
Pores ion channels [TC:
1
]
117254835 (tmc5)
Cilium and associated proteins [BR:
ely03037
]
Other cilia and associated proteins
Stereociliary proteins
117254835 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117254835
NCBI-ProteinID:
XP_033479155
LinkDB
All DBs
Position
6:complement(10195673..10218745)
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AA seq
977 aa
AA seq
DB search
MTSYSNGGFFNPAYHDSDTLEIDRRSSNRTHHANPYARGERVDVYNSYTGQTSRDDAVGG
VPWGGWQEESWRGRESIPMGLVSTRPGSPPWQHDHNHSTFQIPADSQYDRSLPVHLPSAT
SGNMTMRWRGMAMRRMSMFPNGDPAHLALTEDAIRSEMENEEQNLVKELVALSTRDQIRA
IRDLPMSFEEKKHIRSQVLAFKSSKQSRQFKCFADCSESVSLSFRRCGYSLRSARQTLQL
WQGIMKEISGKFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDLTPNIPPNVSF
SGLEILTGAGYFNYTVMYYGGYSNETLVGLVEYNMQLAYFFTIAVYMVLCGIALIFSMAS
SFRKNYVLADSTSNSAWQLLCSWDFNITNERAVRQRKNNLRIQLKESLSEKAQRELLTLS
EKLKHFGVHIGSWLLSTGLAVGCGASIHYLCQYEQQQATDTASWSLLEEAETLLVPFVVS
LINLVVPLFYSLFNKFEPYSSQRRQIYALVVRNVFLKMSILAVLCYHWMNVVANKFSCWE
SMVGQALYRLVIFDFLFLMLGSFFGEFLSNVVGTRLLPRLGVPEFDVARNVLELIYAQTL
AWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRSGRAAQMQTIFIALLFFPFFV
GALSMVAYTAWRLTPSEQCGPFRGLNSTFSVVGVWMDDLQDIPGSQWAVWIYENVIRSEI
FYFLISLIIIVIIYIFWQVTQGRKQLISLLRQQIVNEGKDKSFLLDKLQNLQKSHPDKKS
KKRNQKKHTKRRSDDNSSSGQSNSNAMVQALLARQQLEEEEERRSGGVPVPSDISTSSSV
IQAMWARQRAEDQDGDKSSSSALTQAMQARQRAEGQESDDYYSTGFFENPLNTSSAVTRA
MQARHRAEDVTDDAHDQPSSVSSVMMQVMQARQRAEAEDRTQMVPPPPQNPAPAGSSALI
QAMLARQQAQNEYDDGY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaatggaggattcttcaaccctgcctaccatgacagcgatactctg
gaaattgatagaaggtcttccaacagaacccaccacgctaacccctatgccaggggtgag
agggtggatgtgtataactcgtacactggtcagaccagcagggatgatgctgtgggggga
gtgccctgggggggctggcaggaggagagctggagggggagggaaagcatccccatgggc
ctcgtttcaacgcgccctgggagtcctccatggcagcatgaccacaatcacagtacgttc
caaatcccagctgactctcagtatgatcgatcacttcctgttcaccttccttctgcaaca
tcagggaacatgacaatgagatggaggggaatggcaatgaggaggatgagcatgtttcct
aacggtgatcctgcccacctagctctcacagaggatgccatcaggagcgagatggagaac
gaggaacagaaccttgtcaaagagctcgttgccctgtcaacaagagaccaaattcgggcc
attcgagaccttccaatgagctttgaagagaagaaacatatcaggagccaggtgctggca
ttcaagtcttccaaacaatctcgccagttcaaatgttttgcagattgctctgagagtgtg
tcactgtctttccgcaggtgtggctacagtttaaggtcagccaggcagaccctgcagctg
tggcaaggcatcatgaaagaaatcagtggcaagtttggcaccagcgtcctctcttacttt
gttttcctcaagtggctgctcatgttcaacattttctccttcctggtcaactttggcttt
atcaccatcccgctgcttgtttacgacctcacacccaacatacctccgaatgtgagcttc
agtgggctggagatactgactggagctggttacttcaactacaccgtcatgtactacggt
ggctacagcaatgaaaccctggtgggtctggtggagtacaacatgcagttagcctacttc
ttcactattgcagtctacatggttctgtgtggaatcgcactcatcttcagcatggccagc
tcattcaggaaaaactacgtactagcagactcgacttcaaacagcgcttggcagcttctg
tgcagctgggattttaatattaccaatgagagagcagtgagacagcgcaagaacaatcta
cgtatccaactaaaggagtctttgtcagagaaggcccagagggagctgctaaccctctct
gaaaagctgaagcactttggagttcatattggttcctggctcctctccaccggcttggct
gttggctgtggagctagcatccattacctctgccaatacgaacagcagcaggccacagac
accgccagctggtctctgcttgaggaggcagagactctcctggttccctttgtggtgtct
ctgattaacctggtcgtcccgctcttctactccctcttcaacaagtttgagccctactcc
agccagcgcagacagatctatgctctggtggtcagaaatgtgtttctcaagatgtccatt
ctggctgtcttgtgttatcactggatgaatgtggtggctaacaagttttcatgttgggag
tccatggtgggacaggctttgtaccgtctggtcatttttgatttccttttcctgatgttg
ggatccttttttggagagtttcttagcaatgtggttgggacgagattactacctcgtctg
ggggttccagagtttgacgtagccagaaatgtcctcgaactcatctacgcacagactctg
gcctggattggaatctacttctctcctctgctgccggccattcagatcctcaaattcttc
attttgttctacttaaagaaggtcagcctgacccagaactgccagcctccgaggcgatca
ggcagagcagctcagatgcaaaccatcttcatcgccctcctcttcttccctttctttgtg
ggagccctgtccatggttgcatacactgcctggagattgactccctcagagcagtgcggt
ccttttcggggactcaacagcaccttcagtgtggttggagtgtggatggatgatctgcag
gacatccctggttctcaatgggctgtctggatctacgaaaatgtcatcaggagtgaaatc
ttctactttctcatctcactcatcataatcgtcattatatacatcttctggcaagtcact
cagggccgcaagcagcttattagtctactgagacaacagattgttaatgaagggaaagac
aagtccttcttgttagacaaactccagaatctccagaaatctcatcctgataaaaaatcc
aaaaagaggaatcagaaaaagcacaccaaacggcgttcagatgacaactcctcaagcggc
cagtccaactcaaacgccatggttcaggctttactcgctcgccagcagcttgaagaagag
gaagaaagacgcagtggtggtgtgcccgttccctccgacatctccacttccagcagtgtg
attcaggccatgtgggcccgtcagagagctgaggaccaagatggagataaatcatcctcc
agcgccctcacgcaggccatgcaggccaggcagagggccgagggtcaggagagcgatgac
tattacagcacgggtttttttgaaaaccctctcaacacatccagcgctgtcacacgggcg
atgcaagccagacacagagcagaggatgtcacagatgatgcacatgatcagccatcctct
gtgtcaagtgttatgatgcaggtcatgcaagccaggcagagagcagaggcagaggacagg
actcagatggtcccacctcctccacaaaacccagctccagcaggctccagcgctctcata
caggccatgttggcccggcagcaggctcagaatgagtatgatgacggttactga
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