KEGG   Epinephelus lanceolatus (giant grouper): 117254916
Entry
117254916         CDS       T07331                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ely03041]
    117254916
Spliceosome [BR:ely03041]
 Complex B
  Other components
   Complex B specific factors
    117254916
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 LisH_TPL Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_VPS8 eIF2A VPS8_N Beta-prop_IFT122_2nd DUF5896 Beta-prop_WDR11_1st PD40 WDR54 DUF7165 LisH
Other DBs
NCBI-GeneID: 117254916
NCBI-ProteinID: XP_033479262
LinkDB
Position
6:complement(21055285..21068439)
AA seq 511 aa
MAVEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKNGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYMHLENL
LTCSYFDPREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLEQVGSMRIQGYPGHL
SPDMTIDTSANKDRQVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKLSKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGLCLR
RFEHAHDKGVTCLSFSKDNNQILSASFNQTIRIHELRSGKTLKELNGHSSFVNDAAFTQN
GNHIISASSDGTVKIWNTKSCECIHTLKSLSQTSEVPVNNVIPLPQNPEQFVICNHSDTV
VVMNMHGQTVKTFSSDKKERADFVCCTVSPRGEWIYCVGEDLVLYCFNYTTGRLQKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagatggaaccctcggacgtgatccgcctgataatgcagtacctcaaggag
aacaacctctaccgaacgctgaccaccttacaggaggaaaccactgtctcgctcaacacg
gtggaaagcatcgacagcttcatcgcagacataaagaacggccactgggactccgtcctg
ctggccatcgagtctctcaagctgccagacaacacgcttattgacctttatgagcaagtc
gtgatggagctcattgaaatgagggaggtgggagcagctcgctcactcctcagacaaacc
gaccccatgatcatgttgaagcagacgcagccagagaggtacatgcatttggagaacctt
ctaacgtgctcctactttgaccctcgtgaggcatacccgaaaggcagcagcaaggagaag
aggcgcagggcgatagcagaggcgctggtgagagaggtcagtgtggtgcccccttctcgc
ctcatggggctcctggagcaagttggctctatgagaatacagggctacccaggtcatctc
tcacccgacatgaccatcgacacatctgccaacaaggacagacaggtggagaaggagagt
ttcccaacacagctgtaccgccacatcaagtttgggcggcggtcacatgtggagtgcgcc
cgcttctctcctgatggcaagtacttaatcactggatcggtggacgggttcatcgaggtc
tggaactttaacactggaaaacttagtaaggatttaaagtaccaggctcaggacagcttc
atgatgatggatgatgctgtgctgtgtatgtgcttcagtcaggacacagatcttctggca
accggagctcagaatggcaaaataaaggtgtggaagatccagagcggcttgtgcctccgc
aggttcgagcatgctcacgacaaaggtgtgacctgtctgagcttctccaaggacaacaat
cagatcctcagtgcttcctttaaccagaccatcagaatccatgaactgaggtcaggcaag
acactaaaggagttaaatggccattcatcgtttgtaaatgatgcagctttcactcaaaat
ggaaatcacatcatcagcgcctcatctgacggcacagttaagatttggaacacaaaatcc
tgcgaatgcatccacactttgaagtctctgtcccagacatcagaagtccctgtcaacaat
gtgatccctctgccccaaaatccggagcagtttgtgatttgtaaccactccgacactgtg
gtcgtcatgaacatgcacggtcagacggtgaagaccttcagctcagacaaaaaggagagg
gctgactttgtgtgctgcaccgtgtcaccccgcggggagtggatttactgtgtgggagaa
gacttagtgctgtactgcttcaactatacgacaggaaggctgcagaaaacgctgaccgtt
cacgagaaggatgtaattggcatcgctcaccacccacatgagaatctgattgccacatac
agtgaggacggcctcctgaggctatggaaaccttaa

DBGET integrated database retrieval system