Epinephelus lanceolatus (giant grouper): 117255035
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Entry
117255035 CDS
T07331
Symbol
atg4da
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04136
Autophagy - other
ely04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117255035 (atg4da)
04136 Autophagy - other
117255035 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117255035 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255035 (atg4da)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117255035 (atg4da)
Peptidases and inhibitors [BR:
ely01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117255035 (atg4da)
Membrane trafficking [BR:
ely04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117255035 (atg4da)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117255035 (atg4da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117255035
NCBI-ProteinID:
XP_033479479
LinkDB
All DBs
Position
6:complement(40789300..40799128)
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AA seq
499 aa
AA seq
DB search
MNSVSPSAVQYVGGVMQDELVDSRRQQPLERQGSFGLRLPQTPDPSREATGEPDEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKISPVTVLGHSYLLNSEDEVERFRLAFVSRIWLTYRR
EFPQLEGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWAWPDAQQLTDVDFEVFRPRS
PVRAGGVPIPSFGSPRGSNTPEKSLTSDQAPRCSQRKRPESVRDRQAEPIHHKLVTWFGD
QPPAPFGLHQLVEIGKSSGKKAGDWYGPSIVAHILRKAVAKTSVLHNLAVYVAQDCTVYK
EDVVHLCDISLSQAPPDPSSQAWKSVIILVPVRLGGEALNPSYIECVKNILKLDCCIGII
GGKPKHSLYFVGFQDEQLLYLDPHYCQPVVDVAQVDFSLESFHCSSPKKMPFNRMDPSCT
IGFYAKNKKDFESLCSAVSMALSSSKEKYPIFTFVEGQGQDYGLEGHSSNHSGPAAHILP
PGKLGRSNNRRNSDEFVFL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtttcccccagcgcggtacagtacgtagggggagtcatgcaggatgagctg
gtggacagccggaggcagcagcccctggagcggcagggcagctttggtctcaggctgcct
cagactccagatcccagcagagaggcaaccggagagcctgatgagatggacaaactgaaa
gccaaactgatgtcagcatggaacaatgtcaaatatggttggactgtaaagtctaaaacc
tccttcaacaagatctcaccggtcaccgtcctgggacactcctatctgctcaacagtgaa
gatgaggtggagcggtttcgtctggcttttgtgtccaggatttggctgacctacaggagg
gagttccctcagctggagggctccacctggaccacagactgtggctggggctgtatgctg
cgcagtggacagatgctgctggcacaggggcttctggtccatttgatgcccagagattgg
gcttggccagatgctcagcagctaaccgatgtggactttgaggtgttcagaccgcgttct
ccagtgcgagctggtggggtccccattccctcctttggctctccacgaggatccaacacc
cctgaaaagtccctgacgagtgatcaggcacccagatgcagccagaggaagaggcctgag
tctgttagggacaggcaggcagagcccatccaccacaagctggtcacctggtttggggat
cagcccccagcaccttttgggcttcaccagctggtggaaattggcaaaagttcagggaag
aaggctggtgactggtatggcccctctatagtggcacacatactacggaaagcagtagcc
aaaacctctgtgctccacaacctggctgtgtatgtggctcaggattgtacagtatacaaa
gaagatgtggtgcatttgtgtgacatatctctaagccaggctccccctgatccgtccagc
caagcctggaagtctgtcatcatactggtgcctgtacggctgggaggggaggccctcaac
ccgtcctacatcgaatgtgtcaagaacatcctcaagctggattgttgtattggaatcatc
ggaggcaaaccgaagcattcactttacttcgttggcttccaagacgagcagctactgtat
ctggaccctcactactgccagcctgtggtggatgtcgcacaagtcgacttttcactggag
tcgttccactgtagctctcccaagaagatgcccttcaaccgcatggatcccagctgcacc
attggcttttatgccaagaacaagaaggactttgagtctctatgttctgctgtcagtatg
gccctatcgtcatcgaaggagaaataccccatctttaccttcgtagagggccagggtcag
gattatggacttgagggtcacagcagcaatcacagtggacctgcagcccacattctgccc
ccgggcaaactgggcaggagtaataacagaagaaacagtgatgagtttgtcttcctgtaa
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