Epinephelus lanceolatus (giant grouper): 117255202
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Entry
117255202 CDS
T07331
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117255202 (samd4a)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117255202 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
117255202
NCBI-ProteinID:
XP_033479749
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All DBs
Position
1:46232929..46299427
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AA seq
727 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQGESKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGRHLE
ESRQLLSYALIHPATSLEDRSALALWLNHLEERAAARGDSLERPPPSGPHHHHHQSTPPS
TLSSSGSSSSTNTSSSGNLYSLHHHQRYGSDDRLNGWQSSRDSGLGGGWHQQQQGCENGH
LLLYPSSSVPATINTVGTGGSGNTLLTSGGGSQQHSPLKRSVSLTPPMSGPSNQPLGHVW
LSQEDLRTARGPAPDHAPLSPQSSIASSGSGGSEHLEEAGLGGGSGLHRSSFHDEGSGMR
DVPAWLKSLRLHKYAALFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISILKLKERQNL
LRSLEKDVLEGSNLRAPLQELHQMIMTPIKAFNGGEEASLQRPLLSHEGKSAAPGSHLTG
VGGGGGEAESGASVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHES
FTETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTAGCVGGTGGVS
ARRSLRQFQMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRQGLWFANPGGSNS
MPSRTHSSVQRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALADG
ADRTSTI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcgtgctagccagctggttcaaggggtggaatgagtgc
gagcagactgtggctctgctgtccctgctgaagagggtgagccggacccaggcccgcttc
ctgcagctctgtctggagcactctctggctgagtgcaccgaactccaggtcctggaggga
gaggcaaacaacccaggggtgatcagccagtggcaaggcgagtctaaggagcgggtcatc
tcgcttgtcctcacccatctcccactgctcaaacccggcaacgtcgaagccaagggcgag
tacatgcgcctgctgccacgcatcctggctcacaccatcgagcatggccgtcacctggag
gagtcgcgccagctcctgtcatacgccctcatccaccccgccacctccctggaagaccgc
tctgccctcgcactttggctgaaccacctggaggagagggcggctgcccggggagactca
ctggaaaggcctcctccttctggaccgcaccatcaccaccaccagtccacacctccatcc
accctctcctcatcaggttcctcctcctccactaacacctcttcatcaggcaatctctac
tccttgcatcaccaccagcgctacggctcggacgaccgcctcaatgggtggcagagctcc
agggattcagggctgggtggaggctggcatcagcagcagcagggctgtgagaacgggcac
ctccttctctacccatcatcctctgtgccggcaaccatcaacacggtcgggactggtgga
agcggtaacactctcctgacgagtggaggtggcagccagcagcacagtcccctgaagcgc
tctgtgtccctcacgcctcccatgagtggccccagcaaccagcctctgggccatgtctgg
ctgtcccaggaggaccttcggaccgctcgaggcccagccccagaccacgcaccgctctca
ccccagagcagcatcgcctcctcaggcagtggaggcagcgagcatctggaggaggctggt
ttaggaggagggtcaggtctgcatcgcagttccttccatgatgagggcagtggcatgagg
gatgttcctgcgtggctcaagagtctccgtctccataaatacgccgctcttttttccacc
atgacctacgatgagatgatgtcactgactgaagagcagctagaggcacagaaggtcact
aaaggagcacgacacaagatcgttatcagcatcctgaagctcaaagagaggcagaaccta
ctgcgcagcttggaaaaggatgtgttggagggcagtaatctgcgcgccccgctgcaggag
ctccaccagatgatcatgacgcctatcaaagctttcaatggtggcgaggaggcctccctg
cagcgccccctgctgagccacgagggcaagagcgcagcaccaggctcccacctgactggg
gttggcggaggcggaggggaggctgagtcaggcgcaagcgtcatcgccgagggggatcta
cctggccagttcacacgtgtcatgggcaaagtttgtacccagctactggtgtcgaggtca
gacgaggacaacatcagctcctacctacaactcatcgacaagtgccttatccatgagtcc
ttcactgagacacagaagaagaggctgttgtcatggaaacaacaggtccagaggctgttc
cggtccattccgaggaaaaccctccttgacattgcagggtaccggccgcagaggagccgc
ttcggccagtccaactctctccccaccgctggctgtgttgggggcacggggggcgtgtcg
gccaggaggagccttcgccagtttcagatgccctccaggagcttgccaggtgccaggctg
ggcctgctgggcagcggggggctgctgggacccacacctcgcagctccagcagcacaccc
accggtcccaagcaggggagacagggtctctggtttgccaaccccggaggaagcaacagc
atgcccagtcggacccacagctccgtgcagaggacccgctccctgccggttcacaccaca
ccacaaaccatggtcatgttccaacaagcagatcttcagttaccggtgacagagccagac
atcaacaatcgccttgagtctctgtgtctgagtatgacagagcatgccttggcagacggt
gccgaccgcacatcaacaatatga
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