Epinephelus lanceolatus (giant grouper): 117255245
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Entry
117255245 CDS
T07331
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255245 (sorcs3)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Others
Others
117255245 (sorcs3)
Endosome - Lysosome transport
117255245 (sorcs3)
Endosome - Golgi transport
117255245 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
117255245
NCBI-ProteinID:
XP_033479837
LinkDB
All DBs
Position
6:16196595..16522386
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AA seq
1237 aa
AA seq
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METWAGFCPGLHLSLGIWVMIAAHTLQNAKAEITCASCTSPVQLHLEELQLGMRTDPTQE
PDTLKNIRVEFRELGVTDQNTGVDDGHEAGVSVEDVPQFPQDVNLDGVSAKEDAPGSSEE
SHRGSDKAGEPGHGEDAALRRAKRSGPEFADLSQTGRTGLDAGAPGDRGSLFDGHKLGRS
EFRWNRDEGRGNNRQDEPKLTSSTFSLTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIG
SVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSD
EGASFQKYRLTFYVLSLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQLIHEHVTPNRFYW
SVSGLDKEPDLVHMEAHTPDGNVQYVTCRAQMCTEVNRNYPFPGYIDISSLVVQDDYIFI
QVPTSGRATYYVSYKRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYL
SDTRGIYFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYMTYNKGRD
WRLLQAPATDLEGNDIHCILPFCSLHLQLQTSENPYLSGTISTKSSAPGIIVATGNIGAE
LSYNNVGMYISSDAGNSWRQIFEEEHNVWFLDKGGALVAVKQPSVPTRHLWVSFDEGRQW
TQHSFSSVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTEEDYQT
WHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRSD
GNCRHAFWFNPSTLSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKG
LLLTTKNGKLTANLGSNVTFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEGIKHLY
KSAGIFRVTALAENTLGYDTTTLFLHVTCPVEHVQLLAPFVVIKNKEVNITAVVLPSHSR
TVTYFWWLGNNTEPVITLDGSISHIFPTDGMHTITVQVAASNTILQDTKTIAVKEFFKSL
LLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFLLPH
KNQTEVKKKSEEELEQVSDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSNPRHS
SSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGPGDSTPKITLS
EFSTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggcttgcacttatctctgggtatctgggtgatg
atagccgctcataccctacaaaatgccaaggcggagataacttgcgcatcttgcacgtcg
ccggttcaacttcacctggaggaattacagctagggatgcgcactgacccgacacaggag
ccggacaccctaaaaaacatccgagtagagtttagggaactcggggttaccgaccaaaac
actggagtggacgacgggcatgaggcaggcgtttctgtcgaggatgtcccccagttccct
caagatgtcaatttggatggagttagcgcaaaggaagatgcgccagggtccagtgaagaa
agtcaccgcggcagcgataaggcaggggagcctgggcatggtgaggatgctgcgctccgg
agagcgaagagaagcggtcctgagtttgccgacttgagccagaccgggcggaccggcttg
gatgcgggcgctccgggggatcggggctcattgtttgacggacacaagctgggcaggtct
gagttcagatggaacagggatgaagggagagggaataaccggcaggatgagcccaagctc
accagcagcactttctccctgacgggggactctgcgcataaccacgcggtggtctactgg
tcaggtcaaaacagcagcgtgatcctgattctaaccaagctgtacgactttcatattggc
agcgtcactgagagcacactttggagatctactgactacggctccacgtatgagaggatg
aatgacaaagtgggatccaagaccgtcctgagttacctgtacgtctgcccgactaacaag
agaaagattatggtgttgacagatccggagtttgaaagcagcgtgctcatcagctctgat
gagggggccagtttccagaagtaccgcctcactttctacgtcctgagccttttattccat
cccactgaagaagactgggccttagcctacagtcacgaccagaagctgtacagctcggtg
gactttggaagaaaatggcaactcatccacgaacacgtcacgccgaacagattctactgg
tctgtctccggcctcgacaaggagccagatctggtccacatggaggctcacacaccagat
ggaaatgtgcagtatgtcacatgcagagctcagatgtgcacagaggtgaacaggaactac
ccattccctgggtacatcgacatcagctcactggtggttcaagatgactacatattcata
caggttcctacatcagggcgagccacctattatgtgtcctacaagagagactcgttcata
cagatcaagctacccaaatattccctgccaaaggatttacacattgtcagcactgatgag
aagcaggtatttgccgcggtgcaggagtggaaccagaatgacacctataacctctacttg
tctgacaccagagggatctacttcaccttggccatggaaaatgtcaagactactaggggc
atcggagggaaccagatgctggacctgtatgaggtggcgggaattaaagggatgctgatt
gctaacaagaggcaagacaaccaggtcaagacgtacatgacctacaataaaggccgggac
tggaggctgctgcaggctccggctactgacctggaaggaaacgacattcactgcatactg
cctttctgctcactccatctccaactgcaaacatcagagaacccttacttgtctggaact
atctccaccaagagctctgcaccagggatcatagtcgccacgggaaatattggagcagag
ctgtcgtacaacaacgttggcatgtacatatcatctgacgctggcaatagctggagacag
atttttgaagaggagcataatgtgtggtttctggataaaggaggggccctcgtcgctgtc
aaacagccatctgtgccaaccagacacttgtgggtcagctttgacgaggggaggcagtgg
acccaacacagcttctcctcagtgcccctgttcgtggatggagtcttggtggaggccggg
gctgagaaccaaatcatgaccttttttggacacttcagccaccgctctgaatggcaactc
atcaagatagactacaaatccatctttagcaggaagtgcacagaggaagactatcaaacc
tggcacctgcacaaccagggtgagccatgcgttatgggacagaaacagatatacatgaag
cgcaggcctgggaactactgcatgctgggaaaggactattcaagaatcctctcagctgag
tcctgtatttgtcgggctcatgattttgaatgtgattatggatatgagcgccgcagcgat
gggaactgccggcatgccttctggttcaacccctccactctctccagaagctgcagccag
ggtcaaaactacctcaacagcacagggtaccgtaaagtggtgctgaacaactgcactaaa
ggagttaaagaaatgtacacggccagaaagcagcagtgccccaacagacctcctaaagga
ctattgctgacaacgaaaaacggaaaactcaccgccaacctgggcagcaacgtcaccttc
ctggtgcatctagatgagggtgactctttgcgcaccaacatccagctggatttcggcgat
gggacggctgtttcctactccaacctgagctggactgaggaggggatcaaacacctctac
aagtctgctggaatattccgtgtcacagctctggcagagaacacgctgggttatgacacc
acaacactcttcctgcatgtcacatgtccagtggagcatgtccagcttctcgctcccttc
gtggtcataaagaacaaggaggtgaacatcacagcagtggtcttacccagccactcacgt
actgtgacttacttctggtggctaggcaacaatactgagcccgtgataacactggatggg
agtatctcacacatcttccccaccgacggcatgcacaccatcacagtccaagtggctgca
tccaacaccatactgcaagataccaagaccatagcagtcaaagaattcttcaaatctcta
cttttatctttctcccctaatctggacgagttcaaccctgacatacccgagtggagacag
gatgtggggagagtaattaagaaggctctgctccaagtgtctgacttcccggaggagcag
ctcttggtcgccgtgttcccaggagttccgacagctgctgagctcttcctgttacctcac
aaaaaccagacggaggtcaagaaaaagagtgaggaagagctagagcaggtatcggatata
attgtaagtgcgctgaatcaaaatttggtggagttcgagctcaagccgggagtaagggtg
attgtgtacaacacacagttaacactggcacccttggtggactccaaccccagacacagc
agctcggctatgctgatgctgctatcagtggtgttcctgggcctagcagtgttcctcatc
tacaaattcaagagaaaaataccttggatcaacatatatgctgaggtgaaccaggagaag
gagcaggagatgattggctcagtgggcccgggcgacagcacgcctaaaatcactctgagt
gagttctccacatccaaagaactcatggagaaggaactggatgccagggtcaaaagggga
gttggaaatgcctgcgagagcacaagggagattccaaactgtactagtgtgtaa
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