Epinephelus lanceolatus (giant grouper): 117255291
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Entry
117255291 CDS
T07331
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04110
Cell cycle
ely04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117255291 (smc3)
04114 Oocyte meiosis
117255291 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117255291 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ely00535
]
117255291 (smc3)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117255291 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
117255291 (smc3)
Proteoglycans [BR:
ely00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117255291 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117255291
NCBI-ProteinID:
XP_033479928
LinkDB
All DBs
Position
6:34650408..34679169
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKETLARSEDLDSLVDKTESEIKDHMKN
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGESGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLDSADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccagactgtggta
gacccgttcagtccaaagcacaatgtcatcgttggaagaaatggatcaggaaaaagtaac
tttttctatgccatccagtttgtgctcagtgatgagttcagccacctgcgacctgaacag
cgcctggctctgctccacgagggaactggtcctcgtgtcatttcagcttttgtggagatt
atatttgacaactctgacaaccggctgccgattgacaaagaggaagtctcccttcgccgc
gtcattggtgcaaaaaaggaccagtacttcttagacaagaagatggtgactaagaatgac
gtcatgaaccttctggagagtgccggcttctcccgcagcaacccatactacattgtcaag
cagggaaagatcaaccaaatggccacagcaccggactcccagcgtctgaagctgctgaga
gaggtggcagggacacgggtgtacgatgagcgcaaagaggagagtatttctctcatgaag
gagacagaggggaagcgagagaagatcaatgagctgttgaagtacattgaggagcgtctg
cacaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgaga
agagccttggagtacaccatctacaaccaggagctgaatgaaacccgcgccaaactggat
gagctttccagcaagagagagacctgtggagacaaatccaggcagctgcgtgatgctcag
caagatgcccgagacaaagtagaggagacggagcgtgttgtgcgcgagctgaagtccaag
atttctgccatgaaggaggagagagagcagctttcggccgagcgccaggagcagatcaag
cagaggaccaagctcgagctcaaggccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctgaaggagcgtcagaagctgctggagaaaattgaggagaag
caaaaagagctgcaggagacagaacccaaattcaacatggtgaaggaaaaagaggagcgg
ggtatatccagactggcccaggctacacaggagaggaccgacctgtatgccaagcagggt
cgtggcagccagttcacctcaaaggaggagagggacaagtggattaagaaggagttgaag
tctttggaccaggcaatcaatgacaagaagaggcagatcgcagccattcacaaagacctg
gaggacacagagaccaacaaggagaagaacctcgagcaatacaacaaacttgatcaagat
ctaaacgaggtcaagacccgcgtcgaggaactggacaagaagtattatgaggttaagaac
agaaaggatgagctgcagagcgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccttggcagccaaacgagaggacctggagaagaaacagcagctccttcgagcagct
accggcaaggctattctcaacggcattgacagcatcaacaaagtccttgagcatttccgc
cggaagggcatcaaccagcatgtcatcaatggttaccatggcatcgtcatgaataacttt
gagtgtgaacccgccttttacacctgtgtggaggtgactgctggcaccagactgttctat
cacattgtggagactgacgaggtcagcaccaaaatactaatggagttcaacaaaatgaac
ctgcctggagaagtcacattcctgcctctgagcaagctggacgtcagggacaccgcctac
ccagagaccaatgacgctatccccatgatcagcaagctgcgctacagcaccaactttgac
aaggccttcaagcatgtgtttgggaagaccctgatttgtcgcagcatggaagtttccacc
cagctggccagagcttttaccatggactgtataactctggagggtgaccaggtgagccac
cgtggagctctgacaggaggctactacgataccagaaagtctcgtctggagctgcagaaa
gacatgaggaaggctgaggaggagctgggtgagctggaggccaagctcaacgagaacctg
cgcaggaacattgaacgcattaacaatgagatcgaccagctgatgaaccagatgcagcag
atcgagacacaacagaggaagtttaaggcatccagagacagtattctgtcagagatgaag
atgctgaaggagaagaggcagcagtcagagaagacattcatgcccaagcaacgcagtctc
caaagtctggaggccagcctccacgccatggagtccaccagggaatcactgaaggccgag
ctcggtacagatctgctctctcagctcagcctggaggaccagaggcgtgtggatgacctc
aacgatgagatccgtcaactccagcaggacaacagacagttgctgaatgagaggattaaa
ctggagggcataatgaccagagtggaaacatatctcaacgagaacttacggaagcgtctt
gaccaagtggagcaggagctaaatgagctgcgagagaccgagggaggcacagtgctcaca
gccacaacatccgaactggacggcatcaacaaacgtgtcaaagagactttggcacgatcg
gaagatctggattctttggtcgacaagacagagtcagaaatcaaggaccacatgaagaac
atggagcgctggaagaacattgagaaggagcagaatgacgccatcaaccacgacaccaag
gagctggagaagatgaccaacaggcagggcatgctgctcaagaagaaagaagagtgcatg
aagaaaatcagagagctcggctcgctgcctcaggaggcctttgagaagtaccagaccctc
acactcaaacagttgttccgaaaactggagcagtgcaacacagagctgaagaagtacagc
catgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaagcta
atcaagcgtcaggatgagttggaccgcggctacaaatccatcatggagctcatgaatgtt
ctggagctgcgcaagtatgaggccatccagctcaccttcaaacaggtgtcgaagaacttc
agtgaggttttccagaagctggtgccaggaggcaaagctacattggtaatgaagaagggt
gatgctgaaggcagccagtctcaagatgagggtgagagcggggctgacagtgagaggggc
tctgggtcacagagcagcgttccttcagtggaccagtttactggagttggcatcagggtg
tcgttcacagggaagcagggtgagatgagagagatgcagcagctctctggaggtcagaag
tctctggtggctctggccctgatttttgccatccaaaagtgtgaccctgctcctttctac
ctgtttgatgagatcgaccaggccctcgacgctcaacacaggaaggctgtctcagacatg
atcgtagagctggcaggccacgctcagttcatcaccaccaccttcaggcctgagctgctc
gactccgctgacaagttctacggtgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagactttgtggaggatgacaccacccatggttaa
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integrated database retrieval system
