Epinephelus lanceolatus (giant grouper): 117255502
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Entry
117255502 CDS
T07331
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04144
Endocytosis
ely04517
IgSF CAM signaling
ely04530
Tight junction
ely04810
Regulation of actin cytoskeleton
ely05100
Bacterial invasion of epithelial cells
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117255502 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117255502 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
117255502 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117255502 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117255502 (arpc1a)
05100 Bacterial invasion of epithelial cells
117255502 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255502 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117255502 (arpc1a)
Membrane trafficking [BR:
ely04131
]
Others
Actin-binding proteins
Arp2/3 complex
117255502 (arpc1a)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117255502 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
EIF3I
Beta-prop_HPS5
RMC1_N
Rax2
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
117255502
NCBI-ProteinID:
XP_033480368
LinkDB
All DBs
Position
6:complement(29360491..29370860)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGNKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGGTLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccacgcgtggaaccgcgacagg
acacaaattgccatcagtccaaataaccatgaagtccatatctacaagaagagtggcaac
cagtgggtcaagacccatgagctgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggggcagaccgtaatgcctatgtgtggtct
cagaaggaaggggtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtctccactggagaacaagtttgcagttggtagtggtgctcgactcatc
tctgtctgctactttgagtctgagaatgactggtgggtgagcaagcacatcaagaagcca
atccgctccaccatcctcagtctggactggcatcccaacaacatcctgcttgctgctgga
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggccccacaccctggggcaacaagatgccatttggggctgtgctagcagaatttggagga
gcgggtggagggggttgggtccactctgtctctttctcagcctctggtaaccgcctggcc
tgggtcagccatgacagcactgtcactgtggtggacagctctaagactgccagtccctca
cagctgaagacggagttccttcctctcctcagtgtcatttttgtttcagagaacagtcta
gtagctgcgggtcacgactgttgcccaatgctgtttcgttgcgacgatggtggaacgctg
acatttgtgtcaaagctcgacctcccgaagcagagtatccagaggaacatctccgctatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacactgccctggac
acactgcatcagaacagcatcacccaagtgtctatctatgaaggagacaaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatttgggactttaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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integrated database retrieval system
