Epinephelus lanceolatus (giant grouper): 117255510
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Entry
117255510 CDS
T07331
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117255510 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
117255510
NCBI-ProteinID:
XP_033480380
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Position
3:complement(17467115..17481222)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALAGLVKDGGKESKTKGKDAKDGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLARCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRARVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactctaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaggccaaggctctagccggcttagtcaaggatggtggc
aaagaatcgaagaccaaagggaaagatgccaaagacggaaagaaggacaccagcagctca
acaccgggtgttgccttctctgttgacaatacgataaagcggccaaacccggcaccaggt
acacgcaagaagtccagcaatgccgaggtgatcaaagagcttaacaagtgccgggaggag
aactcaatgagactggacctgtcgaaacggtccattcacatgctgcccacctctattaag
gagttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccggct
gaggtgggttgcctatcaggcctggtcactttggccctgagcgagaactccctgaccagt
ttgcctgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctcagagagataccggctgttgtttaccggctgacgtctctgaccacgctgtacctgcgc
ttcaaccgcatcacaacagtggagaaggacatccgaaacctatccaagctcactatgctc
agcattcgtgagaacaagattaaacagctgcctgcagagataggggagctatgcaacctc
ataactctggatgttgcccacaaccagttggaacacctaccgaaggagattgggaactgc
acacagataaccaaccttgacctgcagcacaatgagctcttggacctcccagagactata
ggcaacctagcaagtataaaccgcttaggtctgcgatacaatagattgtcagccatcccc
aggtcattagccagatgtcgagaactggaggagctaaacctcgaaaacaacaacatttcg
gtgttgccagagggcctgctgtcaagtttggtcaacctgaccagtctaacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgcatcaacaagatcccctttggtatcttctccagggccagggtg
ttaagcaagcttaacatgaaggacaaccagttaacatctttgccgttggactttggcaca
tggacgagcatggtcgagctcaacctggccaccaatcagctgacgaagatcccagaggac
gtctgtggtttagtctctctggaggtgttaatattgtccaataatcttctcaagaagtta
ccacatggtattgggaatttgagaaagctacgggagctcgacttagaggaaaacaagttg
gaatcgctacctaatgaaattgcgtatcttaaagatttacagaaattggtgttgacaaat
aatcagctgaccacattacccagaggcatcggccacctcaccaacctgacgcatctcggt
ttgggggagaacctgctgcaacacctcccagaggagattggtacactggagaacttggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccgcagatt
gtcgcgggaggcccctctttcatcatccagttcctcaagatgcagggaccataccgtgcc
atggtctga
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