Epinephelus lanceolatus (giant grouper): 117255514
Help
Entry
117255514 CDS
T07331
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117255514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117255514
03009 Ribosome biogenesis [BR:
ely03009
]
117255514
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117255514
Spliceosome [BR:
ely03041
]
Complex A
U1 snRNP components
U1 related factors
117255514
Complex B
117255514
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
Helicases
117255514
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
117255514
NCBI-ProteinID:
XP_033480396
LinkDB
All DBs
Position
3:complement(14729759..14738709)
Genome browser
AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDATRRPLQEIEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMEVIVKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YIQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSSYRDRDSDRGFGSGPKSAFGGNKVQNGG
SYGGNSGNSSGSYGNNNYSNSNGQGNFGAPANQVGAFGNQSFQGPPQFGAMQRAAQNGMN
HPPFPFNSQPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcggacagagatcgcggcagagacagagggtatggtggaggacctcct
cgctttggtggtggcggaggaggcaataggggtggacctcctccaggcaagtttggcaac
cctggtgagaggctgcggaaaaagcactggaaccttgacgagcttccaaagtttcaaaag
aacttctaccaggaacatcctgatgccacacgcagaccacttcaagagattgaacagtat
cgaagaagcaaagaagttacagtcaaaggcagagattgcccaaaaccaattgtaaaattc
catgaagctgcatttccaagctacgtcatggaagttattgttaaacagaactggactgag
ccaactccgattcagtctcaggggtggccagttgccctgagtggcaaagacatggttgga
atcgctcagactgggtctgggaaaacccttgcttaccttctgcctgcaattgtgcacatc
caacatcagccattcttggagcatggagatggacctatttgcttggtgctggcaccaacc
cgtgagctggctcagcaggtgcaacaagtggctgctgaatatggcagggcctcccgtctc
aagagcacctgcatctatggtggtgcgcccaaaggaccccaaatcagggaccttgagagg
ggtgttgagatttgcattgctactccaggtcgtctcattgacttcctggagtgtggtaag
accaatttacgtcgttgcacctatctggtgctggatgaagctgaccgcatgctggacatg
ggatttgaacctcagatccgcaaaatagtggaacaaattcggccagaccgtcagaccctg
atgtggagtgccacctggcctaaggaagttcgccagctggctgaggacttcctgaaggac
tacatccagatcaacattggcgcactgcagctcagtgccaaccacaatatcctgcagata
gttgatgtttgcaatgacatggagaaggaggacaaactgatccgtttgctggaggagata
atgagcgaaaaggagaacaagactattatttttgtggagaccaaaaggcgttgtgatgag
ctcaccaggaggatgagaagagatgggtggccagcaatgggaattcatggagacaagagt
cagcaggagagggactgggtccttaatgagttcagatacggcaaagctccaatcctcatt
gctacagatgtggcttcccgtggcttggatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggattatatccatcgcattggacgcacagcccgaagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagtgacctg
atctctgtgctccgcgaggccaaccaggccattaaccccaagctgatccagatggccgag
gacagaggaggtcgtggaagggggggaagaggtggctacaaggatgaccgtcgggatagg
tattccgggggtgggaggagcaactttggcggtagtagctacagggacagggacagtgat
agggggtttggcagtgggccgaagagtgcctttggtggcaataaggtccaaaatggtggc
agctatgggggcaacagtggtaactcaagtggtagctatggcaacaacaattatagcaac
agcaatggacagggtaattttggtgctccagcaaatcaggtgggtgcctttggtaaccaa
agcttccagggcccccctcagtttggggccatgcaaagagccgctcagaatggcatgaac
cacccaccattcccattcaactctcaaccaccaccacaggcccaacagccaccaccccca
ccaccaatggtgccctaccccatgccaccacccttcccacagtag
DBGET
integrated database retrieval system
