Epinephelus lanceolatus (giant grouper): 117255549
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Entry
117255549 CDS
T07331
Symbol
tmc8
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117255549 (tmc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117255549 (tmc8)
03037 Cilium and associated proteins [BR:
ely03037
]
117255549 (tmc8)
Transporters [BR:
ely02000
]
Other transporters
Pores ion channels [TC:
1
]
117255549 (tmc8)
Cilium and associated proteins [BR:
ely03037
]
Other cilia and associated proteins
Stereociliary proteins
117255549 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Spo7
Anoctamin
Motif
Other DBs
NCBI-GeneID:
117255549
NCBI-ProteinID:
XP_033480460
LinkDB
All DBs
Position
3:20140348..20151745
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AA seq
710 aa
AA seq
DB search
MEEHNNVNFMRLLSDESTQSTVSSDSCEYYQTEIFDQLPSIQASRPEQDRQGSWETCEAY
QGGPEAGERISHGHLSRDKASTQPLRNLVMCIQGKRDARDRRKMQISSIGFWESWRRSQS
INRKRVWAQMRGALSGLLPWQQKLRAIEGRFGVGVKSYFVFLRYLVYLNFLHCALISGFI
LGPTAFYGRSNSSEPLKFGGNDSVLDFFLGSGYLDRSPVFYGFYTRGSLNLMCLNTPLLY
LAGVLIILFLSLIMVVRRTTVGYKHTWMLGKRYSMNVSYKIFCGWDFTIQDPAAATLKQS
FIRNDLKLFLEEQSFSLRESQRTLRQRVRLYLLRFVLNLLVLSLLGGAFYLIYFATKTSD
YKNGYWLVSLVLQYLPPITITFVNLVLPHIFRKISSFEDYSFTMQVNATLVRSIFLKLAS
LAIYLFFLFPTTERQQNPSHCGENRIGREMYKLCIFNFLATFCNAFLMNYPRKLVQEKYP
LSLLARLSGKQRFLIPFNVLDLVYGQTVSWVGVYYCPLLPLIGTVTLMATFYIKKFTVLR
CCVAEQRMFRASSSSVLFHFMLLLGLFMAAAALGFNLYQQEAAPNKNISSCGPFGNGETL
FNVTGVCMNSLPGAAQTTLRYLASEAFALPLILAEIIILTSYVSRGRANQKAIERLKDML
VMSSSDKRFLVKQHATMLRRQRNPLRVRSAPIKEDAPLNHWKDHPSTDAN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacaataatgtcaacttcatgagactcctgtcagatgagagcactcagtcc
accgtgtcgtcggactcctgtgagtactatcagacagagatatttgatcagctgcccagc
atccaggccagcaggccggagcaggacagacagggttcatgggagacatgcgaggcctac
cagggtggcccagaagcaggggagaggatcagccatggccacctgtccagagacaaggca
tctacacagccactcaggaacctggtcatgtgtattcaagggaagagagacgccagggac
aggaggaagatgcaaatcagcagtattggtttttgggagtcctggaggcggagccagagc
atcaacaggaagagggtttgggcgcagatgagaggagctctatcaggcctgttgccatgg
cagcaaaaactccgtgccatcgaaggcaggtttggagttggtgtgaagtcgtactttgtg
ttcctcagatatctggtttacctgaactttcttcactgtgctctcatctcgggttttatt
ctggggcctacggcattttatggccggagcaacagcagtgaacctttgaagtttggaggc
aatgactctgttttggatttcttcctgggatcgggctacctggatcgttccccagtcttc
tatggtttttatactcgtggttccctgaatttgatgtgcttgaatacgcctctgctgtac
ctcgctggagtcctcatcatcctcttcctcagtctcatcatggtggtccgtcggacgacg
gttggctacaagcacacctggatgctcgggaagcgttacagtatgaacgtgagctataaa
atcttctgtggttgggacttcaccatccaggaccctgctgctgctactctcaaacagagc
ttcatcagaaacgatctcaagctgttcctggaggagcagagtttctccctgcgtgagtct
cagaggacgctcagacagagggtgcgtctttacctgctcaggtttgtcctcaacctgctc
gttctgtctctgttgggtggagccttctacctcatctacttcgccaccaaaacatcagat
tacaagaatggttactggttggtcagtctggtgctccagtacctccctcccatcaccatc
acctttgtcaaccttgtcctcccccacatcttccgtaagatctcatcttttgaagactac
tctttcaccatgcaggtcaatgcaacacttgtgaggagcatcttcttgaagctggcctca
ctggcgatctacttatttttcctcttcccaacaacagaacgtcagcaaaatccttcccat
tgtggggagaacaggattggtcgagagatgtacaagctgtgtatcttcaacttcctcgcc
actttctgcaacgcctttctcatgaactaccccaggaagctggtgcaggagaagtatcct
ttatccttgctggcccggttgtcagggaaacagcgcttcctgatccctttcaatgtgttg
gatctggtgtatggtcaaacagtgtcctgggtgggagtctactactgccctctgctgcct
ctgataggaactgtcacactgatggccaccttctacatcaaaaagttcacagtcctgcgg
tgctgtgtggcagagcagaggatgtttcgtgcctccagctcatccgttttattccacttc
atgttgctgcttggcctcttcatggctgcagccgcactgggcttcaacctctaccagcaa
gaagctgcaccgaacaaaaacatttcctcctgtggtccttttggaaatggagaaactctg
tttaacgtgacaggagtgtgtatgaacagtctgccaggcgctgcacagaccactctccgc
tacctggcctctgaggcctttgccctgccgctcatactggctgagattataatcttaacc
tcatatgtgtcacggggacgagccaatcagaaggccatcgaaagactcaaagacatgctg
gttatgagcagctcagataagcgtttcctggtgaaacagcacgccacgatgctcagacgt
cagagaaaccccctcagagtgcgttctgcacccatcaaagaagacgcccccctcaaccac
tggaaagaccacccctccacggatgcaaactga
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