Epinephelus lanceolatus (giant grouper): 117255625
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Entry
117255625 CDS
T07331
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117255625 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117255625 (fip1l1b)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117255625 (fip1l1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117255625
NCBI-ProteinID:
XP_033480616
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Position
6:complement(41523614..41534276)
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AA seq
557 aa
AA seq
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MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAALSAPGDASTEDAAADAA
AHATGNGVASEATAEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTPYGAPPVNLNI
KTTGSRPYGQASKMKGVDLEAPGNINGVPVLEADMESFEEKPWRKPGADLSDYFNYGFNE
DTWKAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDIPSLPVHTSKPDFTSPVSL
YKPAVSQVTRISPPQWPGPPVQDMSYYTKPSGTIDVIGGGTATISRVEGRRRHNLEGNNI
QVIAEQSDAEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVNTAPPLIPPPRLPITVPPP
GFPPPPSGPPPSIIPTMDSSHGGGYDGRSVPPYPFPQGAYPPPMAGGVPPPWPPIMDNSK
PWDYYSRRDDKREKERERPRERTHEREREREHSPSAIGYTSDEERYRYREYQERGYGERH
RDRSSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGK
EASEDISADQENQEAME
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaaccaccactgatgccagcgccggagatgaggag
gaggaatggctgtatggagatgagtcagagagcaaagatgaggacgaggaagccaaactg
aatgctgcactcagtgcacctggtgatgcctcaacagaggatgccgctgctgatgcggct
gcacacgctacagggaatggagtggcctctgaggcgacagctgaagctgcaggtgaggac
gttgacagtgacagcgacagtgacgacgacgacgatgatgtccgtgtcaccattggagac
atcaaaactggagcaccacagtacacaccttatggagctccgcctgtcaacctcaacatt
aagacaacaggctccagaccctatggacaagcctccaagatgaagggagtggacctggag
gctcctggaaatataaacggggttcccgtgcttgaggcggacatggagtcctttgaagaa
aaaccctggaggaaaccaggagcggatctgtctgactactttaactacggcttcaatgaa
gacacatggaaggcttactgtgaaaaacagaagagactgcgcatgggccttgaggtctcc
actgtcggctcagtgacaagcaagatcactgttcagcaaggcaggacgggcaatgagaag
gacatacccagtttacctgttcacacctccaagccagacttcacatctcctgtcagtctg
tacaagcctgctgtcagtcaggtcaccaggatctctccccctcagtggcctggcccacct
gttcaggacatgtcctattatacgaagcccagtggtactatagatgtgattggcggaggg
acagccaccatcagcagggttgaagggcgacgcagacacaatctagaaggcaacaatatc
caggtgatcgctgaacaatcagacgccgagccgactccagctaaaattcctactttcttc
cctcccggaccgcttcctccaaacatacccccacctccgttcctccctccaccacccaac
gtcaacactgcacccccactcatccccccacccaggttgcccattactgtccctcctcct
ggttttcctcctccacccagcgggccccctccatcaattatccccacaatggacagtagc
catggtggaggttatgatggacgctctgtccctccatacccattccctcaaggtgcatac
cctccacccatggctggaggtgtgcctcctccttggccccccataatggacaactctaaa
ccctgggactactattctcgtcgagacgacaagagagagaaggaaagagaaagaccccga
gagaggacacatgagagggagagagagagggaacacagtccttcagctatcggctacacc
agcgacgaggagcggtatcgttaccgtgagtaccaggagcgtggttatggagagcgtcat
cgtgaccggtcgagccgggagaaagaggaaagacacagagagagacggcaccgagagaaa
gaggagggacgccacaagtcctctcgcagcagcagtagcaggaggaggcacgacagcgag
gagggcgacagccaccggaggcacaaacacaagaagagcaagaggagcaaggagggcaag
gaggccagcgaggacatcagcgcagaccaagaaaaccaggaagccatggagtag
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