Epinephelus lanceolatus (giant grouper): 117255784
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Entry
117255784 CDS
T07331
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255784 (lrba)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Others
Others
117255784 (lrba)
Endosome - Golgi transport
117255784 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117255784 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
SUKH_6
WD40_MABP1-WDR62_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
117255784
NCBI-ProteinID:
XP_033480856
LinkDB
All DBs
Position
6:complement(25707002..25944478)
Genome browser
AA seq
2957 aa
AA seq
DB search
MASEETAGAAQPGDGKDGRSGAMALNPGVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VGLIQQVLQRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTSKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHIYNR
WKNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFAYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSS
HELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKFSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNTIRR
VGTVLQVMHTLKYYYWVINPQDRSGVVPKGVDGPRPNQKEILSLRAFLLLFVKQLIMKDH
GVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVIYKLLAS
KSEGIRVQTLKVLGYFLKHLPPKRKPEVMLSHGLFSLLTERLMLHSSQFTMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNSPPSPESMEVRKVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQRRESGGSQSTIRTISGVSQSSETAECVNGP
PAEETAPSTVIELTVDKLSQKSPDSASSSTITSSPPEAADGRGHSSIIVSNILAREEEEK
QNLDQESSKVGSGDNEKETEVSVTQKSDQEEQSEDTNKQEPVTESSTDKNADDLQTSVSD
QPETDDTKDSAATSASDDAQTPLTDDEKSKSVKGESSNSMTEDSLNEAETELRAVSEQEG
KTDQTSPEAAACLEESVQDGASVLNEGPVDASSVSDHIQPSDADDSQEESSYASAVAGEE
GEAGEKDVKHEDDETKKNDEEDQEMKKDEEKEEKQEVGVEEKIEESESEEKQVSVLESQT
PPAETPEQTVTEPPKEEVVDEQSSSTTETATADEQPSDTTPPSTAQEVAAASDSTSPSQP
SETTGTTEEETVSGPTDGSTASSSSDIQKSADSASKTKEIKIARLDVSNVALDTERLELK
ETSATETSQGQPATATTAAAAAGGSSGQQSSTSAPRSTMFRIPEFRWSHMHQRLLTDLLF
SIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATS
SSHELENIEPSQGLAVEASVTFLQRLISLVDVLIFASSLNFTEIEAEKNMSSGGILRQCL
RLVCAMAVRNCLECQQAQFKQGSEAAARSYTAMPNTALGAAMSAAAQSPVDAVTGGVSPV
RDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKH
PQRSQSARSTDSGAISGGLEVENGVSLRRYDSGIGDDHTSTAASEADLSSSGVTHGPDAI
SEALSTLSSEVRPSLPTDSKGKNVKDILRSLVSTPGDDIMVDSSLLPPAFLGSVGDAARE
SSQQFRSFDRSVIVAPKKAGVTPSPGTSTTVPAATAASVSGVTPMDSVAVVSSGDDSQGA
SADSAATGGQVPASASLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAP
FLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNE
GRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIR
AAKYRDHVTATQLIQKIVNILTDKHGAWGSSSASRPREFWRLDYWEDDLRRRRRFIRNPS
GSTHSEATLKAAAEHASEEDILKGKQSIRSQALGNQNSESETSLDGDDDTLSSLEEKDLE
NLTGPVNLSTSVQLVAPAAVVKGTLSITASELYFEVDEEDPGFKAIDPKILAYTEGLHGK
WLFTEIRAVFSRRYLLQNTALEIFMANRTAVMFNFPDAATVKKVVHSLPRVGVGTNFGLP
QTRRISLATPKQLFKASNMTQRWQRREISNFDYLIFLNTISGRTYNDLNQYPVFPWVITN
YDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTL
MWLLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFV
NANDYTLGVMEDGTVVSNVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQ
QGPEATRALNVFYYLTYEGAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSA
MQVYLLLQTPLMFTEQMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFAV
NKWHGLTGHQSSTVQDQQYQLPVEIDPLIANNVGSHRRQISDLLDQSIQISSQCFVITAD
NRFILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATL
LLWYWNGKHNSIGESPGTEFTTPRAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSM
NGDLLRTLESPERCLRPRLIQSSTEGHCIIYYDKGQFCHFTVNGKLLGHMEVEDSIKAMY
LSRDGQYLLTGGDGGVISVWQVYNLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIV
LFYNDFNRWHHEYQTRY
NT seq
8874 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggcgctgcgcagccaggtgatggaaaggacgggagatca
ggcgccatggcgctcaaccccggagtgcctatcagggggataaggatgaaattcgccgtg
ctcgctggcctggtggaagttggggaagtttccaaccgagacattgtggagacggtgttc
aacctgctggttggcggccagtttgaccttgagatgaacttcatcatccaagaaccggaa
agcattgtatgcatggtggagctgctggacaaatgcgagcccacctgtcaggccgaggtc
tggagcatcttcaccgccatcctcaagaagagcgtccgcaacctgcaggcgtgcactgat
gtggggctcatccagcaggtgctccagcgcatatccaccactgacagcatgatcgcagac
ctgctggtggacatgctgggcgtgcttgccagctacagcatcacagtgaaggagttaaag
cttttcttcagcaaactgcaaggggagaaaggccagtggcctcgtcatgcagtgaagctt
ttgtcagttctgaagtacatggctcacaggaatggccccgactccttcttcagctttccg
gggaaaaatgcagctgctatagctctgcctcctatagcgaaatggccgtaccagaatggg
tttacattccacacatggctccgcatggatcccctcaacaacattaatgtagacaaagac
aagccttacttgtactgttttcgcaccagtaaaggcatgggttactcggcacactttgtt
ggtggctgtttgatagtgacctcattaaaatccaaggggaaaggattccagcactgtgta
aagtatgacttcaaaccgcagaagtggtacatggtgactctcgttcacatctacaaccgc
tggaaaaacagtgaaataagctgctatgtgaacggggaactggcttcctttggagacata
gcctggtttgtcaacaccagtgacacgtttgacaagtgtttcctgggatcgtctgagacg
gcagatgccaaccgtgtattctgtggacagatgggggcagtttacctgtttggagaagct
ctcagtgctgctcagatcctggctatctatcagctgggaccgggttaccagggcacgttc
aagtacaaggctgagagtgacttgctttttgcggagcatcataagaccttactgtacgac
ggcaagctgtctagtagtattgcctttgcttataacccccgcgccacagatgcccagctc
tgccttgagtcctcccccaaggacaacgcctccattttcgtccactcaccccacgcactc
atgctgcaggacgtgaaggccgtggtgactcactcagtccagagtggcatacactctatc
ggaggcgttcaggtcctcttccctctgtttgcacagctggattattgccagccctccagc
cacgagctggacacctctgtctgctgcactttgctatcctttgtgatggagctcttgaag
aactcagtggctatgcaagagcaggtcctggcctgcaaaggctttctcgtcatcggctac
actttggagaagttttccaaggtgcatgtgacgcggcccgtcctggacattgtgctggcc
ttttccagataccttagcaacttgcagaatggcattttgctgctcaagcagctgtgtgac
cacattctgttcaaccctgccatctggatccatgcccctgccaaggtgcaactgacactc
tacacttacctggcaacagagttcatcagcacagtgaccatctacaacaccattcgcagg
gtgggcactgtgctccaggtcatgcacacgctgaaatactactactgggttatcaacccc
caggaccgcagtggagttgtgcccaagggtgtagatggtccgaggccgaaccagaaggag
atcctctctttgcgagcctttctgttgttgtttgtcaagcagctcataatgaaggaccat
ggagtgaaggaagatgagctccagagtatcctcaactacctccttaccatgcatgaggac
gacaatctcatggatgtactgcagttgttggtggctctgatgtctgaacatcctgggtcc
atggtccaggctttcgaccagcgcaacgggattcgtgtgatttacaaacttttggcctca
aaaagtgaaggaataagggtgcagacactcaaagtactgggctactttctcaaacacttg
ccaccaaagaggaaacctgaggtcatgctgagtcacggcctcttctccctgctcactgaa
cgcctgatgctccactccagccagttcaccatgacaacctacaacgtgctcttcgagatt
cttacagagcagatctgcactcaagtgatccataaacagcatccggaccctgactccact
gtgaagattctcaacccacaaattctgaaggtaatcgctgctctgctgaagaactctccc
ccatcccccgagagcatggaggtgcgcaaggtctttctgtcagacatgatcaaactgttc
aataacagcagagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
ctctctctgtgcttcatcaacccgcgcaacagcgaggagcagaaaatcacagagatggtg
tacgccatcttccgcatcctgctctaccacgccatcaaatacgagtggggcggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtcacctttgagcagcacaaagag
aatctatcccgtatgttccgtcagtaccagcgtcgggagtctgggggctctcagagcact
atccgaaccatctctggtgtcagccaaagctcagagaccgctgaatgtgtcaatgggccg
cctgcggaggagacggctccttctactgtcatcgagctcacagtggacaagctgtcccag
aagtcccctgactcagcatccagttccaccatcacttccagcccaccggaggctgccgat
ggaagggggcactcatccatcattgtgtccaacatcctggccagggaagaggaagaaaag
cagaatttggatcaggagtcttccaaagttggctcgggtgacaatgaaaaagagactgaa
gtttcggtgacacaaaaaagcgaccaagaggaacagagtgaagacaccaacaagcaggaa
ccagtgactgagagttccaccgataagaacgctgatgatcttcaaacatcagttagcgac
cagcctgaaacagacgacacaaaagactctgctgcaacatctgcgagtgatgatgcacaa
acacctctaacagacgatgagaagtctaaatctgtcaaaggtgagtcatcaaactctatg
acagaagactctttgaatgaagcagagacagaactacgagcagtttcagaacaagagggt
aagactgaccaaacgtcgcctgaggctgcggcctgtctggaggaaagcgtgcaggatgga
gcttctgtcctcaacgagggcccggttgacgcatcatctgtcagtgaccatatccagcca
agtgatgctgatgatagccaagaggagtcctcttatgcttcagctgttgccggagaggaa
ggggaggcaggggaaaaagatgttaaacatgaagatgatgaaaccaagaaaaatgacgag
gaagatcaggagatgaagaaagacgaagaaaaagaagagaagcaggaagtcggagtagag
gaaaaaatcgaagagagtgaaagcgaggagaaacaggtgtctgttttggagagtcagact
cctccagctgaaacacctgaacaaactgtgacagaaccacccaaagaagaggttgtagat
gaacagtcttcctccacaactgaaactgctactgcagatgagcagccctctgacaccaca
ccgccctctacagcccaggaggttgcagcagcatcagactccacctcacccagccagcct
tcagagaccaccggcaccactgaagaggaaactgtgtctggtcccacagatggcagcacg
gcctcctccagctctgacatccagaagagcgcagactctgccagcaagaccaaagagatc
aagattgcccgactggacgtgtccaatgtggccttagacacagagagacttgaactgaag
gaaacctctgcaacagaaacaagccaaggccagccggcaacagcaacaacagcagcagca
gcagcaggagggtcttcaggtcaacagagcagcacttcggcccctcgttccaccatgttt
cgcatcccggagttccgctggtcccacatgcaccaacgccttctcactgacctgctcttc
tctattgagactgatgtccagatgtggaggagtcactccacaaagacaattctggacttt
gtgaacagcagtgagaacgttgtgttcgtccacaacagcattcacctcatctcccaggtg
gtggacaacctcatcatggcttgtggaggcattttacctctgctttctgctgccacctct
tcttctcatgaacttgagaacattgaaccatcccaaggcttggcggtggaggcttcggtt
actttcctacagcgcctcattagccttgtggacgttctcatctttgccagctccctcaac
ttcacagagatagaagctgagaaaaacatgtcgtcaggaggcatcctgcgacagtgcctt
cgccttgtgtgtgctatggcagtgaggaactgtctggagtgtcaacaagcccaatttaag
caaggctcggaagccgcagcacgcagctatacagccatgcccaacactgcgcttggagca
gccatgtctgcagctgcgcagagtcctgttgatgcagtgacaggtggggtctctccagtc
agagatctggacaggcttctccaggacatggacattaaccgcctcagggctgtcgtcttc
agagacattgaggacagtaagcaggctcagtttttggcgcttgccgttgtctacttcatc
tcagtcctcatggtgtccaaataccgcgacattctggagccccacaatgacaagaaacac
cctcaacgatcacagtcggccaggagcacagatagtggtgccatttctggaggactagaa
gtggagaacggtgtctctctccggcggtatgattctggcatcggtgacgaccacacctca
accgcagcaagtgaggcagatctgtcatcctctggcgtgactcatggtccagacgccatc
tcagaggccctgtctacactgtcctctgaggtcagaccttctctgcccactgattcaaag
ggcaagaatgtgaaagacatcctgcgcagcctcgtgagcaccccgggtgatgatatcatg
gtcgactcgagtctgctgccaccagcatttctaggaagtgtgggcgatgcggccagggaa
tcatcacaacagttccgctcctttgacagaagtgtcatcgtggcacccaagaaagccggc
gtgacaccatccccaggcacttccacgaccgtcccagcagccactgctgcatccgtttct
ggtgtgacacctatggacagcgtcgccgtagtatcttctggagatgactcccagggcgcc
tctgcagactctgcagcaacaggcggccaggttccagccagcgctagcctgccatctgtc
cccccactctcccctgtgacccagaacacagcccccaatatgagtatctcagagcgtctg
gagcacgctctggagaaggcagctcctctgctgagagagatctttgtggacttcgccccc
ttcctctctcggaccctgctgggcagccacggacaagagctccttattgagggcacgagc
ctggtgtgtatgaagtccagcagctcagtggtggagctcgtcatgcttctgtgttcacag
gaatggcagaactccatccagaagaatgcaggtctcgcctttatcgagttggtcaacgaa
ggcaggctgctgagtcacaccatgaaggaccacctggttcgtgtggctaatgaagctgaa
tttatcctcagccgacagagggccgaagacatccataaacatgcagagtttgagtcgaac
tgtgctcagtacgcagcagagaagagggatgaggagaaaatgtgcgaccacctgatccga
gcggccaagtaccgcgaccatgtgacagccacacagctcatccagaagatagtcaacatc
ctgactgacaaacatggagcctgggggagctcttccgcaagccggccgagggagttctgg
cgcctggactactgggaggacgatttaaggcggcgacgtcgcttcatcaggaacccctcc
ggatccactcactccgaggccacgctcaaagccgcggctgagcacgcgtccgaggaggat
attctcaaaggcaagcagtccatcaggagtcaggctctgggaaatcaaaactcggagagt
gagacatcacttgacggagacgatgacactctgtcatccttagaggagaaggacctggag
aacttaacaggccctgtaaacttgagcaccagtgttcagctggtggctccggccgcggtg
gtgaaaggcaccctgtccatcaccgcctccgagctctacttcgaggtggatgaggaagac
ccgggctttaaggccatcgatccaaagattctagcttacacagaaggtcttcatggaaaa
tggctcttcacagagatccgtgctgtcttttccagacgctacctgctgcagaatacagct
ctggaaatcttcatggccaacagaacggcagtcatgttcaacttcccagatgcagccaca
gtgaagaaggtggtccacagtcttcctcgtgttggggtgggcacgaactttggccttcca
cagaccagacgtatctctctggccacaccaaagcagctatttaaggcatccaacatgacc
cagcgctggcaacgacgcgaaatatccaacttcgattacctcatctttctcaacaccatc
tctggccggacctataatgacctaaaccagtacccagtcttcccctgggttatcaccaac
tacgactcagaggaacttgacctcactctgcccagcaacttcagagatctatccaagcct
attggtgctttaaaccccaagagggcagcattcttttcagaccgatatgagtcctgggag
gatgatcaggtgccgaagttccactatggcacccactattccacctccagcttcaccttg
atgtggctactgcgaatcgaacccttcaccacgttttttctcaacttccaaggagggaag
tttgaccacgctgaccgcaccttctcctcagtgtctagggcgtggaggaactgccagaga
gacacttctgatgtgaaggagctgatcccagagttctactacctccccgagatgtttgtc
aacgccaacgattacaccctgggagtgatggaggatggcactgtggtctctaatgtggag
ctgccgccttgggccaagagcccagaggagtttgtgcgcatcaatcgcctggctctggag
agcgagtttgtgtcctgccagctccaccagtggatcgatctgatctttggctacaagcag
cagggacctgaagccaccagggccctcaatgttttctactatctgacctacgaaggtgca
gtcaacctcagctccatcagcgaccccatgctcagagaggctgtggagtctcaaattagg
agttttggacagaccccctgccagttactcattgagccacacccaccccgaagttcagcc
atgcaagtgtatcttctcctgcagaccccgctgatgtttacggagcagatgcagcaggat
gttatcatggtgctgaagttcccatccaactctcccgtgacccacgtggcggccaatacc
cagccaggtctgacgtcgcctgctatcatcaccgtcacagccaaccgtctcttcgcagtc
aacaagtggcacggtttgacaggtcatcagagctcaacggtgcaggaccagcagtaccaa
cttcctgtggaaattgaccctctgatagccaataacgtgggcagtcatcgtcgtcagatc
tcagacctgctggatcaaagcattcagatcagctcacagtgtttcgtcatcacagccgac
aaccgcttcatcctcctgtgcggcttttgggacaagagcttccgggtttactcgactgac
tcaggcaaactgacgcagatagtgtttgggcatcgcgacgttgtgacgtgcctggctcgc
tctgagtcgtacatcggaggagactgctacgtcctgtcggggtccagagatgccaccctg
ctgctgtggtactggaacggaaagcacaacagcattggagagagcccaggcacagagttt
accacaccgcgggccatcttaacgggccatgactgtgaagtgacgtgtgcgagtgtgtgt
gcggagcttggtctcgtcataagtggctgcaaagagggtccttgtctgatccattccatg
aatggggacctgctgcggaccctggagagcccagagcgctgcctgcgtcctcgtctcatc
cagtcctccaccgaaggacactgcatcatctactacgacaagggacagttttgtcacttc
actgtcaacggcaaactgctgggacacatggaggtggaagacagcatcaaggccatgtat
ctgagtcgggacggccagtatctgctgacaggcggagatggaggtgtaatatctgtctgg
caggtctacaacctcaaacagctgttcacctacccaggctgtgatgcaggaatccgctct
atggccatgtcacatgaccaaaggtgcatcataacgggcatggcgtctggaagtatcgtg
ctcttctacaacgacttcaacagatggcaccacgagtaccagaccaggtactga
DBGET
integrated database retrieval system
