Epinephelus lanceolatus (giant grouper): 117255818
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Entry
117255818 CDS
T07331
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117255818 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117255818 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117255818 (zgc:136908)
03009 Ribosome biogenesis [BR:
ely03009
]
117255818 (zgc:136908)
04131 Membrane trafficking [BR:
ely04131
]
117255818 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117255818 (zgc:136908)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117255818 (zgc:136908)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117255818 (zgc:136908)
Membrane trafficking [BR:
ely04131
]
SNARE
SNARE associated proteins
Others
117255818 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117255818 (zgc:136908)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117255818 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
RNA_helicase
AAA_14
Vps4_C
AAA_28
NPHP3_N
Parvo_NS1
ATPase_2
nSTAND3
DUF815
Mg_chelatase
AAA_7
ATPase
AAA_18
IstB_IS21
AAA_17
ABC_tran
NACHT
ResIII
TsaE
AAA_24
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
117255818
NCBI-ProteinID:
XP_033480913
LinkDB
All DBs
Position
6:33594362..33605317
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGGADPKGEDLSTAILKQKHRPNRLIVDEALNEDSSIVSLTQDKTEELQLFRGDTVV
LRGRKRRQTVCIVLTDDTCGNERIRMNRVTRNNLRVRLGDVVSIFACPDIKYGKKIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPIHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGSFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLASDIDLERIATETHGHVGADLAALCSEA
ALQAIRKKMILIDLEDETIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
IGGLDEVKKELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDGSGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLQYLSSITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQSRPG
IPMEEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSGGQGSGSGSGRPGLYSDDGNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagacccaaagggagaagatctctccactgccatcctgaag
cagaaacacagacctaacagactcattgtggatgaagctctcaatgaagacagcagcatt
gtcagcctgacacaggataagacagaggagctgcagctcttccggggggacacggtggtg
ttgagaggacggaagcgtcgccaaacagtgtgcatcgtcctgactgatgacacctgtggg
aatgaaagaatccgcatgaatcgtgtgacgcgcaacaacctgcgtgtccggctcggtgat
gtcgtcagtatttttgcctgccctgatatcaagtatgggaaaaagatccatgtcctcccc
atcgatgacaccattgagggcctgacaggaaacctctttgaggttttcctcaaaccatat
tttctggaggcttaccgacccatacataaaggtgacatcttcttggtgaggggaagcatg
cgcgctgtggagttcaaggtggtggagactgaccccagccctcactgcattgtcgcccca
gacactgtcatctactgcgagggagagccaatcaaaagagaggacgaggaggagagcctc
aatgacatcggctacgacgacatcggaggctgtcggaaacagctggctcagatcaaagag
atggtggagcttcctctcagacaccctggccttttcaaggctatcggagttaagcccccc
agaggaatcctgctgtatggccctgcaggcacagggaagacgctggtggcccgggctgta
gccaatgaaactggttccttcttcttccttatcaatggtcctgagatcatgagcaagctg
gcgggagagtcagagagcaacctaagaaaggcgtttgaggaggcagagaaaaacgctccg
gccatcatctttattgatgagctggacgccatcgcccccaagagagagaagacccatggt
gaagtggagaggcgtatcgtctcccagctcctgaccctgatggatggcctcaagcaaaga
gctcatgtagttgtcatggcagccacaaaccgaccaaacagtgtggacgctgctctaaga
cgcttcggcaggtttgaccgggagatcgacattggaatccctgattcgactggcagactg
gagatcctgcagattcacaccaaaaacatgaaactggctagcgacatcgatctggagagg
atcgccacagagacccacggtcacgtaggcgccgacctggctgctctgtgctcagaagct
gctcttcaagccatccgcaagaagatgatcctgatcgacctggaggacgaaaccatcgac
gctgacctgctcaactcactggctgtcaccatggatgacttccagtgggctctgagtcag
agcaacccatcagctctgagagagactgttgcagaggtgccacaggtgaactgggaggac
atcggaggactggacgaggtcaagaaagaactgcaagagcttgtccagtatcctgtcgag
tatccggacaagttcctgaagtttggtatgactccgtctcgtggagtgttgttctacggc
cctccgggctgtgggaaaaccctgctggctaaggccatcgccaacgagtgccaagcaaac
tttgtgtccatcaaaggacctgagatgctcaccatgtggtttggagaatcggaggccaat
gtcagagacgtgtttgataaggccagacaggcagccccatgcatcttgtttttcgacgag
ctagactccatcgccaaatccagaggaggcggagcaggggatggaagtggtgcagctgac
agagtcatcaaccagatactcacagagatggacggcatgtcggacaaaaagaatgttttc
attattggtgccacgaacagaccagatatcattgactctgccatcctgcggccaggccgt
ttggaccagctcatctacatcccgctcccggacaaaccatctcgcactgcaatcctcaac
gccaacctacgcaagtctcctgttgcacgagatgtggacctgcaatacctgtctagcatc
acagatggtttctccggagctgacctgacagagatctgccagcgggcctgtaagctggcc
atccgcgaggccatcgaggccgagatcaaggctgagcgtcagaggcagagcagaccaggc
atccccatggaggaggactttgatccagtcccagagatcaggaaggaccactttgaggag
gcgatgcgattcgctcgtcgctctgtcagcgacaatgacatccgcaaatatgaaatgttt
gctcaaactctgcagcagagccgaggttttggaaacttcaggttcccctctgctactggt
acccggtctggaggtcaggggtcaggctctgggtcagggaggccaggcctgtacagcgat
gacggcaacgatgatctctatcagtga
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integrated database retrieval system
