Epinephelus lanceolatus (giant grouper): 117255899
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Entry
117255899 CDS
T07331
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117255899 (rhbdl3)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117255899 (rhbdl3)
Peptidases and inhibitors [BR:
ely01002
]
Serine peptidases
Family S54: Rhomboid family
117255899 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
DUF4229
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
117255899
NCBI-ProteinID:
XP_033481024
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Position
6:complement(39818499..39906447)
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AA seq
414 aa
AA seq
DB search
MEKSSPRMTGGTREAPVNSSPAVASNAEGEEIEVLESTDVLPVAPEDQWKSLFDKYDPEN
SGFISTERFRDLLATHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRA
ILQGSRQLKGCSLRDEAGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWLILAIT
IAEVAVFMYYGFQLDRLVLQVSSPFFLKSPLPYHPQLRAQAWRYLSYIFMHTGIEHLSLN
MAMQLLVGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLA
NVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVVVG
LTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAIFWNIFAYSLLDVRLPPPP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagcagcccgaggatgacgggcggaacccgggaggcgcctgtgaactcctct
ccggcggtggcgtccaacgcggagggcgaggagatcgaggttttggaaagcaccgacgtc
ctccccgtggccccagaggaccaatggaagtctctgtttgacaagtatgacccagagaat
tcgggcttcatcagtacggagcggttcagggacttgctggcgacccacggctctgagctt
gacccccacaaactggaagtcctattggccctcgctgatggcaacgctgacggaaagatc
tgctaccaagactttgtcaacctgatgagtaacaagcgctccaacagtttccgcagggcc
atcctgcaggggagcaggcagctaaaaggctgcagtctcagagatgaggcgggcttgggg
ctgtctcagaggctggtccgacacgtcgcctatgagacgctgccccgcgaggtcgaccgc
aagtggtactttgacagctatacctactgtcccccaccatggctcatcctggccatcacc
attgctgaggtggccgtgttcatgtactatgggttccagctggaccgcttggtactgcag
gtgtccagcccgtttttcctaaagagccccttaccttaccacccccagctccgtgcccag
gcctggaggtacctcagctacattttcatgcacaccgggattgaacatctgagcctgaat
atggccatgcagctgctggtgggagtccctctagaaatggtccatggagccctgcggatt
ggactggtctatgtgtgtggtgtgctggcagggtctctggcggtttctgtcactgatatg
acagctccagtggtcggctcatccggtggagtgtacgctctggtctcagcacatttggcc
aatgtagtaatgaattggtcgggaatgaagtgtcagtttaagttattccggatggccatg
gctctggtttgcatgagtgtagagtttggtcgggcggtgtggctgcggttctatcctccg
gcctttcctccgtgccccaatcccagctttgtagctcacctgggaggagtggtggtaggc
ctgacgcttggcgtggtggtcctgcagaactatgagcagcgactccaggagcagtccctg
ttttggatcttcttctgtgtctacaccttgtttgtgctctgcgccatcttctggaacatc
tttgcctacagcttgcttgatgtgcgactgcccccgccaccttga
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