Epinephelus lanceolatus (giant grouper): 117255906
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Entry
117255906 CDS
T07331
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117255906
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117255906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117255906
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117255906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
117255906
NCBI-ProteinID:
XP_033481036
LinkDB
All DBs
Position
6:complement(35439361..35480901)
Genome browser
AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFIDAKKILLYTQNDK
SYEGYKGLLRALRKMQKNTARFKLKDFLRDNETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADHNVSRMTQEIICKSSSDWLNKAQSHFLSNLDF
LKPIRKDVRSDPKFVQEVSAATDNLLESLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDNEPLSAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKVWNFMENSEEMDMVRTLLQNNASAAFFNAQLSGTEWRVSDVSAFLSKVSEDQR
PKGSAYTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHSNSTDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEHGIIRALTGSKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDS
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KIVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENNNISTPLSKKGNAEAVCSEEEPSH
IEPGVYIENLVKVYSHGNKLAVDGLSLKFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGRDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRHSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYSKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVP
EARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGTD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALDPGMYGEQFTFISNDMPEDPHTNKLQGALTENPGFGTRCMEGQPIPDTPCTAV
KDEWSVPQVPQSVKDIFDNGNWSMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMKIS
EKDTLQNLTGRNISDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSLGARNSQLMSQAGDVD
DAIAELKRRFRLERGTAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNG
ILRASLKPDQDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPFLYWLANFIWDMCNYIVPATLVIIIFVCFQQDAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVIFFCITVLIQYHFCFKARSSTSHLKPIGEEDEDVARERQRILSGGGQTDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSMVTSGEAYL
AGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLVKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RPVMEFIERELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSKNKETLSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDVHLNKRDAVVVDISQLNSFLTDNKTRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttactgctttggaagaacttcacctaccgacggaga
cagactatccagctgctgatagagataatctggcccttgttcatcttcttcatcctgatc
tcagtccgaatacattatccaccctacgagcaacatgaatgccatttccccaacaaggct
atgccctcagcgggtaccctgccctgggtacaaggcatcatctgtaacgccaacaacccc
tgcttccgtaatcccaccccaggcgagagtccggcggtggtgggaaacttcaatgattct
ataatctcccgtttgttcatcgatgccaagaaaatcctgctgtacacccagaatgataaa
agctacgagggctacaagggactgttgagggccctcaggaagatgcagaagaacactgct
cgtttcaagctaaaggactttttgcgagacaatgagaccctttcccacttcctgcaccac
aacgcttcacttcctcatcacgcgctgaagcagatagtggaagctgacgtcaatctggag
aaggtgctcaccaaaggtttcggtttccacctcagagacctctgtaacaccacgcccctg
gaggagtttgtccacattgccgaccacaacgtgtcccgtatgacccaagaaattatatgc
aagtcctccagcgattggctaaacaaggcccagagccacttcctgtccaacttggacttc
ctcaaaccaattcggaaggatgtgaggtcggatcccaaattcgtccaggaagtctcggct
gcaactgacaatcttctggagagcctaggagcactggccgtggagcttgccagtatgaag
agttggaaggacatgcgtaaggagatcctgtatctaactgcaaatgccacaggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtatgtggacaccctgaaggaggcggcctc
aaaatcaagtctcttaactggtatgaagacaacaactacaaggcactgttcggaaaccat
ggcaacgacagcgacaatgaacctctttctgcttacgacaactcttccactccgtactgt
aacaacatgatgcggagcctggagtccagccccatatccaggatgatctggagagctctt
aagcctctgctcatggggaagatcctgtacaccccagacactccagccacacagagaatc
atccatgaggttaataagaccttccaggagctcggcgtgctgagggacctcggagggatg
tgggaggagatgaagcccaaagtttggaactttatggagaacagcgaggaaatggacatg
gtcaggaccctgctccagaataacgccagtgctgcattttttaatgcccagctcagtggg
actgagtggcgtgtgtcagatgtgtcggccttcctgtctaaggtctcagaagaccaaagg
cctaaaggatccgcctatacctggagagatgtcttcaatgaaaccgaccaagccatacag
acaatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtggccaatgag
gagagactggtcaacaagtccatgggtcttttgaacaaccagaagttctgggctggaatc
gtgttccctgacatcgcccatagcaacagcactgacttgcctcccaacatcaactataag
atccgcatggacattgataatgtggagaggacaaacaagattaaagatggctattgggac
cccggtcccagggcagaccccttcgaggaccttcggtacgtctggggcggattttcttac
ctgcaggacgtcattgagcatggaatcatcagagccctcactggcagcaaggagaagacg
ggcatctacattcagcagatgccctacccctgctatgttgatgacattttcctgcgggtg
atgagtcggtcaatgcctctcttcatgaccttggcgtggatgtactcagtagccatcatc
atcaaaggcgtggtatacgagaaggaggcccggctcaaggagaccatgaggatcatggga
ctaaacaacggcaccttgtggctcagctggttcatcagcagtttaatcccactcctgatc
agtgctggcttgttggtgatgttattgaagatgggaaacctgctgccttacagtgactca
ggcgtggtgtttcttttcctgggatccttcggcgttgtgaccatcatgcagtgtttcctc
atcagcaccctgttctctcgcgccaacttggcagccgcctgcggtgggattatttacttc
acgctctacctgccctacgtgttgtgtgtcgcctggcaagactacgtgggctttggagca
aaaatagtagtgagtctgctatctcctgtggcttttggtttcggctgtgagtactttgcc
ctgtttgaggaacaaggggtgggcatccagtggtcgaacctgttggccagccctctggag
gaagacagctataacctgaccacctccatctgcctgatgctgtttgacgccgtgctctac
ggaataatgacctggtacatcgaagctgtgttccctggtcagtatgggatccccaggcct
tggtatttccctttcaccaggacgtactggtgtggagaaaaggagaacaacaacatctcc
actcctctgtcaaagaagggcaatgctgaagctgtgtgcagtgaggaggagccgagccac
attgagccaggtgtttacatagagaatctggtaaaggtctacagccatggaaacaagctg
gctgtagacggactgtcactgaagttctataaggggcagataacctccttccttggccac
aatggagcgggcaagaccactactatgtcaatcctgacgggcttgtttccacccacatcg
ggcacagcctatatccacggcagggacatccgcaccgaactcagcaccattcggcagaat
ctgggcgtctgtcctcagcacaacgtactcttcagcatgctgactgtggaggaacacatc
tggttctacgcccgtctgaaggggctgccggaggagaaggtgaaggctgagatggaacaa
attgtgaatgacgtgggtctgcctcacaaacgtcattcccgcaccagcacactgtccgga
gggatgcagaggaagctgtccgtggccctggcttttgttgggggctcaaaggttgtgatc
ctggatgaacctactgctggcgttgatccctacgcacgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggacgaggcagac
atcctgggtgaccgcattgccatcatctctcacggcaagctgtgttgcgtaggctcctca
ctcttcctgaagacccacctgggcacaggctactacctgactctggttaagagagactac
gacttgacacttcagtcttgcaggaattcagccagcaccgtctcctacagcaagaagact
gagaaggaggacagtgtatcagagagcagctcagatgccggtcttggtagcgaaccagag
agtgaaaccaccactattgatgtgtccctcatctccaatgtgatattcaagcatgtcccc
gaggctcgtcttgttgaagatcttggccacgaaatcacctatgtcttgccctaccagtca
gctaaagacggagcctttgtggagctcttccacgagctggatgaccgtctcactgacctg
ggaatatccagctatggaatatctgataccaccctggaggagattttcttgaaagtggct
gaggacagcggggtggatgttgagctctcagatggagttgtgccgacaaggactcgtcgt
catcatgcgtttggagaccaccagagctgcctgaagccctttactgaggacgactttgac
ttcaacgactctgaaggtgacccagaatcccgtgagaccgactggctcagtggaacagat
ggcaaaggctcataccaggtcaaaggctggagtttgaagagacagcagtttgttgcacta
ctctggaaacgatttctctatgctcggcgctccaggaaaggcttctttgctcagattgtt
ctcccagctgtgtttgtgtgtattgccctggtgttcagtctgattgtccctccatttggg
aagtacccaagtctggctctggatcccggcatgtatggagaacagtttacctttatcagt
aatgacatgcctgaggaccctcacaccaacaaactccagggagctctgacagaaaaccca
ggattcggaacacgctgcatggaaggacaacccataccagacactccctgcacagcagtt
aaagatgagtggtcggtcccgcaagtccctcaaagtgtgaaggacatcttcgacaacggc
aactggtccatggagaatccctctcccctgtgtgagtgcagctgcgaaggacgcaagagg
atgcttccagagtgtcctgctggtgctgggggactcccaccaccacagatgaagatcagt
gagaaagacactcttcagaatttgaccggcagaaacatctcagattatctggtcaaaacc
tatgctcagatcattggcaagagcctgaggaacaagatttgggtcaacgagttcagatat
ggtggattctcactgggcgccaggaattctcagcttatgtcccaagccggcgatgttgat
gatgcgattgctgaactgaaaagacgtttccgtcttgagaggggaactgcagcagatcgt
ttctttcacagtctctccagttttatccaaggattggacaccaagaataacgtcaagatc
tggttcaacaacaagggctggcacagcattggttctttccttaatgtcatgaacaacggc
atcctgcgggcgagtctgaaacccgaccaagaccccaccaagtttggcatcactgcctac
aatcacccgctcaacctcaccaaggagcagctgtcacaggttgcactgatgacgacatca
gtggatgtgctggtttccatctgcgtgatcttcgccatgtcctttgtccctgccagtttt
gttgtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagcggc
gtgcagcctttcctctactggctggccaactttatctgggatatgtgtaattacatcgtc
cctgccacactggtcatcatcatcttcgtgtgtttccaacaagacgcctacgtctcctcc
accaatctgccggtgctggcactgctgctgctgctctacggatggtcgatcacccctctg
atgtacccagcctcgttcttcttcaagatacccagcacggcctacgtggttctgaccagc
gtgaacatactgataggaatcaatggcagcgtctccacattcgtgctggagctgtttgga
agcaatgaaattggtggcatcaacgacatcctaaagaacgtgttcctcatcttccctcac
ttctgtctgggcagaggactgattgacatggtgaagaatcaggcaatggctgatgctttg
gagagattcggtgaaaaccggttccgctcccctctggcctgggacatggtgggaaagaac
ctgtttgcaatggccatagagggcgtgatcttcttctgcatcactgtcctcattcagtac
cacttctgcttcaaggccaggtcatccaccagtcatctcaagcccatcggagaggaagat
gaggacgtagccagagagcgacagagaatcctgagcggaggagggcagacagacatcctg
gagctcagacagctcaccaagatttacaagaggaaacagaagccggcagtggaccgactg
tgtgtaggcatcccccctggagagtgctttggtttgctgggggtgaatggagcagggaaa
accagcacctttaaaatgctgacaggagactctatggtcaccagtggagaggcctacctg
gctggcaagagtgtaactacagagatagatgaggtgcatcagaacatgggctactgtcct
cagtttgatgccatcaacgacctgctgaccggcagagagcacctggagttttatgccatc
ctgagaggagtgcctgagaaggaagtctgtgaggtggcagagtggggcatccggaagctg
ggcttggtcaaatatgtggacaaggcagccggcagctacagtggaggaaacatgaggaaa
ctatctactgccatcgctctcataggaggtccacctgtagtgttcctggatgaaccaaca
acaggcatggatcctaaagcgcgtcgtgctctgtggaacgcaattcttagcatcatcaaa
gagggacgatctgtagtcctgacctcccacagcatggaggagtgtgaagcactttgcacc
agaatggccatcatggtcaacggcaggttccgctgtctgggcagtgtgcagcatctcaaa
aacaggtttggtgatggttacaccatcatcctgcgggtggctggcccagacccagatctg
cggccggtgatggagttcatcgagcgggagctgcctggcagcacactaaaagaaaaacac
cgcaacatgcttcagtaccagctgcccacctccctcacatccctcgcacgcatcttctcc
ctgctctcaaaaaacaaggagaccctcagcatagaagactactccgtctcacagacaacg
ttagaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccatttgaaagat
gtccatctgaacaaacgggacgctgtggtagtggacatttcccagctaaactctttcctc
acagacaacaagaccagggagagctgtgtctga
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integrated database retrieval system
