Epinephelus lanceolatus (giant grouper): 117255953
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Entry
117255953 CDS
T07331
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117255953 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255953 (vps35)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117255953 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
117255953
NCBI-ProteinID:
XP_033481113
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All DBs
Position
1:complement(50493753..50509771)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLPGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTILAQEQVDAILNLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNLRIRYTLPPLVFAAYQ
LAFRYKENSSMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtctccccaggatgaacaggagaagcttctggatgaagctgtg
caggctgtcaaggtccagtcgttccagatgaagcgatgcctggacaagaacaagctgatg
gatgctctgaagcatgcttctaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactatgaactctatatggctatctctgacgaactccactacctggaagtttat
ctgaccgatgagtttgccaaaggacgtaaggtggcggatctctatgaactggtccagtat
gcaggaaacatcatccccagactctatctgctaatcacagtgggcgtggtgtacgtccgc
tccttccctcagtcccgtaaggacatccttaaggacctggtggagatgtgtcgtggtgtc
cagcacccactcagaggcctcttcctcagaaactacttgctgcagtgcacccgcaacatc
ctgccagatgatggagagcagtcagagggaacagaggagatgaccggtgacatcaatgac
tccatcgactttgtccttctcaactttgctgaaatgaacaagttgtgggttcggatgcag
catcagggtcacagccgagaccgagagaagagagaaaaggaacgacaggagctcaggatt
ctggtgggcaccaacctggttcgcctcagccagctggagggcgtcaacgtggacaagtac
aaacagattgttcttcctggagtgctggagcaggttgtgaactgcagagactcgttggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagttccaccttcagact
ctcaacccgttcctacgttcctgtgctgagctccaccaacacgtcaatgtcaagaacatc
atcattgccctcattgacagactggctctgtttgctcatcgagaagacggccctggcatc
ccagctgagatcaaactgtttgacatcttctctcaacaagtggccactgtcattcaatct
cgtcaggacatgccatcagaggacgtggtctctctccaggtgtctctcatcaacctggcc
atgaaatgttaccctgaccgagtcgactatgtagacaaggtcctggagagcactgtggag
atcttcaacaagctcaacctggaacacatagcgaccagcagcgcagtgtcgaaggagctc
acccggctgctcaagatcccggtggacacctacaacaacatcctgacggtgctgcagctc
aaacacttccctccgctcttcgagtactttgactacgagtcacgcaagagcatgagttgc
tatgtgctgagcaacacgctggactacaacaccaccattctggcacaggaacaggtggat
gccatcttgaacttggtgtccacactgatccaggaccagccagaccaaccagctgatgat
cccgaccctgaggactttgcagaggagcagagcctcgtgggtcgtttcatccacctgctc
cattctgaagatcctgatcagcagtatctgattctgaacacagcccggaaacactttggt
gcaggtggaaacctgaggattcgctacacactccctcctctggtgttcgctgcctaccag
ctggccttcagatacaaagaaaactcctcaatggatgacaagtgggaaaagaagtgtcag
aagatcttttcctttgcccatcagaccatcagtgcacttatcaaggcggagctcgccgag
ctgcctctgcgactcttcctgcagggggcgctggctgcaggcgagattggctttgagaac
cacgagactgtagcttatgagttcatgtcacaggccttctctctgtacgaggacgagatc
agcgactccaaagcccagctggcagctatcacgctgatcatcggtacctttgagcgaatg
cgatgtttcagcgaggaaaaccacgagccgctgaggactcagtgtgcgctggctgcctcc
aagctgctgaagaagcccgaccagtgccgagccgtcagtatctgcgcccatctgttctgg
tccgggcgcagcaccgacaaaaatggtgaagagatccgtgatggtaagcgggtgatggag
tgtctaaagaaagctctgaagatcgccaaccagtgtatggacccgtcgctgcaagtccag
cttttcattgaaatcctcaacagatacgtctgcttctacgagagggaaaacgatgcggtg
actgtccaggtattaaaccagctgatccagaagatcagggaagatcttcccaacctggag
gccagcgaggaaacggagcagatcaacaaacacttccacaacacactggagcatctccgc
ctgcagagagaatcccctgagtcagagggccccgcctatgagggcctggtcctttaa
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