Epinephelus lanceolatus (giant grouper): 117256018
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Entry
117256018 CDS
T07331
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117256018
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117256018
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117256018
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117256018
NCBI-ProteinID:
XP_033481196
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All DBs
Position
6:10823206..10838695
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AA seq
651 aa
AA seq
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MRGGSSYGDRDRDRGRDRPRFGPMSSRSGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
GEHPEVQRMSQYDQEEFRRKKEITVRGSGCPKAVTAFHHAQFPQYVMDVLLQQNFKEPTA
IQAQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDHIQ
INIGALELSANHNILQIVDVCMETEKDQKLFQLMEEIMAEKENKTIIFVETKKRCDDLTK
RMRRDGWPAMCIHGDKSQPERDWVLGEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SCSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQLVESGR
GGGGGGGRMRYRGSSSNNPNLMYQGECDRRMHGGGGSKDSRGGFGRDSRNSRDGDRSTSS
ASSSYRDRSRDHRNSYNSGSDQYQSYNSGGGYNTRSGGQSGGGQDQSNQQQGQFGQPPAP
PPPSQSSGGLQPLMAQQFVPPQPGLMGFMGQPPFPFASPPPPPPGPPPPRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggttcttcctacggagacagagacagagaccgtggacgagacaggccacgg
tttgggcccatgagcagccggagtggacctccacctatgaagtttgggaatccaggtgag
cgtctccgtaaaaagaggtggaacctggacgagctgccaaaatttgagaagaacttctat
ggtgaacatccagaagtccagcgcatgagtcagtatgatcaggaagaatttcgcagaaag
aaggagataaccgtcagaggctccggctgtccaaaggcggtcactgcctttcaccatgca
cagtttcctcagtatgtgatggatgtgctgttgcagcagaacttcaaggagccaacagca
atccaggctcagggctttcctgtggccctgagcggcagggacatggtggggattgcccag
actggctccggaaagacactggcgtatcttcttcctgctattgtacacatcaaccaccag
ccctatctggagaggggagatggcccaatttgtctggtactcgctccgaccagagagctg
gctcagcaggttcaacaggttgcatatgactacggcaagtcttcccggatcaaaagcacc
tgtgtctacggtggagcacccaaaggaccacagattcgagatctcgagaggggtgttgag
atctgtatcgccacccctggtcgccttattgacttcctggagagtgggaaaactaacctg
cggcgctgcacctacctcgtgctggatgaggctgatcgcatgctggacatgggctttgag
ccacagattcgcaagatagtggaacaaatcaggccagacagacagactctgatgtggagt
gcaacctggccaaaggaggttcggcagcttgccgaggacttcctgagggaccacattcag
attaatattggtgctctggagctcagtgccaaccacaacatcctgcagattgtcgatgtc
tgcatggagactgaaaaggaccagaaactttttcagctgatggaggagataatggctgaa
aaagagaacaaaacaatcatctttgtggagacgaagaagcgttgtgatgatcttaccaag
aggatgaggcgggacgggtggccagccatgtgtatccatggagacaagagccagccagaa
agagactgggtactcggagaatttcggagtggcaaagctccgatactgattgctacagat
gtggcctctcgtggtctggatgtggaagatgtcaagttcgtcatcaactatgactatccc
agctgctctgaggattacgtgcaccgtattggacgcacggcccgcagtaccaacaagggc
actgcctacacattcttcaccccagggaatttgcgccaggcgcgagaccttgtccgggtg
ctagcggaggcccggcaggccatcaaccctaaactgcttcagctggtggaatctgggcgt
ggtggtggaggaggcggtggcagaatgcgttaccgtggcagcagctccaacaaccctaac
ctcatgtaccagggagagtgtgatcgccgcatgcacggtggtggcggcagcaaggacagc
cgcggtggcttcggccgtgatagccgcaacagccgtgatggagaccgctccacttcctcc
gcctcttcctcctacagggacagaagccgggatcacaggaacagctacaactcaggctca
gatcagtaccagagttacaacagcggcggaggctacaacacgcgcagcggaggccagtct
gggggaggtcaggatcagtctaaccagcagcagggtcagtttggccagcctcctgctcct
cctcctccttctcaatcatcaggggggctgcagcctctgatggctcagcagtttgtacca
ccacagccagggcttatgggcttcatgggtcaaccgcctttcccttttgcttctccaccc
cctcctcccccaggccctccacctccccggaagtag
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