Epinephelus lanceolatus (giant grouper): 117256329
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Entry
117256329 CDS
T07331
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117256329 (chd9)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117256329 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117256329
NCBI-ProteinID:
XP_033481579
LinkDB
All DBs
Position
1:complement(19405067..19486343)
Genome browser
AA seq
3021 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVESLDQGKHQDMMPPVTT
QQAMPAYSQQMGHYIGIKAQSPMVHAFSGPGGTGGGGGGVIADQHGQYHNAAMTQVPQSN
GLFCNSGSPMWGNQDRNGNVYHPLSQQPQQLCHQQQQLHNQQLHVRQQQTQQQQHRPCHQ
QQEQQHHRMRQQLQQQQSHQQQLLNQRQHQQINTQTMSLQQQQHHNFSFHQGGQSRSQQQ
GHHTQQQVQHQLTVGGPRFHSRAMPSKSYLDGQNASLSGTCLQPQQQQQGSYQLARGGQA
FSGSGSEDSNLPFPMHSSSMVHSLPTCSASSATAYQPAQYPSYPGEPEMPSLSQQSLSTA
SVSMPTTSTEPLTSTVPELSGTVCQFATTAVMRTPVSQAEECPFRALHCSGETQANCKSS
EMFGESMNCYPSIASQLPSEQPQSCGAINTNGYQELGDSLLPSDAQEEDLGGLESPDLLP
DLLPQLEAALSQQDESNCSWVDSSHERGHEHKKPPPVECKEEKPRKNANGPSSQVRVLSP
PLKSSSSSSSSSSSSSSSSSSPSEKRTPRRTHHQMESTSQDKQEKANRIISEAIAKARQR
GEKNIPRVMSPESFPSSSSQYKHRKREHKGSGKARPKEKDCRKACIVPSSKPKQKAKIGK
IVIKIGKKKKRKPESSEESDDDPPPRHSSKDDDSKRRSNRQVKRKKYAEELEARLSDDEV
KVIVKAKKTNTAASKQPAVQLFVENPSEEDAAVVDKIMSSRMVKKEVSPGVVVEGEEFFV
KYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEEPFNPDYVEVDRV
LEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRAE
RPPANLWKKKEQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITF
LEEIHRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRDT
QGRAIRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMM
ELRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPESERFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFD
RASLKLGLDKAVLQSMSGRDNSLGGGAGGGAVQQLSKKEIEDLLRRGAYGAIMDEEDEGA
KFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADI
DMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGNSDSDDTKPKLRRNHDRLNSYG
RTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTERDVESICRALLAYCLVHYRGDDKIKS
FMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKHNPEHML
QDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQRVLDGADSSEIKIWVPDPDHSELP
ALWWDAISDKCLLLGVFKHGYEKYNTLRADPTLCFLERVGRPDEKAIAAEQRGNDFMDGD
VDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDVVPATSETSYWPSPSVLTARLRRLI
TASQRYTKSRQILQIHQTQTQSPSTMILSAPLCPLPPTLNDTLNPKMAAKIERQQRWTRR
EEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLP
PKEGDSAVDPSLNIQPITEERASRTLYRVELLRQVREQVLRHQLLYERLPLCQMSSDLPV
WWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKTAQQQSRTSTPLLH
SQCQATSSLLTGSPLPPTAQREAEPGGVVPKVEPASGGEEGQEKQGESWSPPRAPATPTG
LEEKPVSETRDNERQMVAARTKPLTPNSTERKPKKASKRSRRETRRGSDSDSDGSSSSSS
SRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEGKKKVAAA
TSVKGFDEDSVASLSTTQDETQDTHTAENGITNSSSHPFQGGGYMLAASYWPKDRVIINR
LDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAE
NKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHELQSASDTGLADI
TKPQCSFQTGPPGVTGQMRLNGVLDGQPVVKRRRGRRKNVEGMDLLFMNRSRVPAVPDQV
PPGWGGIGQVGVAAGVAAGVAAAAVPGYSQSSSQAPADTDSRVPVINLKDGTRLAGDDAP
RRKDLEQWLLEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTG
EERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRI
LTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAAAAAPNPAASALGLNPLLANGLLSGMDLT
SLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSGLI
GKPAQEGTGVSEEKTKGTSSVVTGEPSASKAPSHTSDTKGERTEGSNTTPSSTSSSTSSV
TAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQPQSSNSDPTLPPAR
PPPPAVSQSSPQETEQLAAERDGEEDDEALEDEEEEEEEEEEEEDSAEQKENSGPEGSGK
AESSSSESGSSSSSDDSDSSD
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccctaacctctttgttggaggtttggaagggctggacgaggat
ggcttcccctcggcaccatcacttgtggatgagctaaacctcagtgccgacttcgagccc
ctccaagtggagtctctagaccaagggaagcaccaagacatgatgccaccagttactacc
caacaagccatgcctgcttatagtcagcagatgggtcactacattggcatcaaagcacag
agtcctatggtgcatgcattttctggacctgggggcacaggtggtggaggtggaggcgtg
attgcagaccagcatggccagtaccataatgctgccatgacccaagtacctcagtccaat
gggctgttctgtaacagtggcagtccaatgtggggcaaccaggatcggaatgggaatgtg
taccaccctttatctcaacaaccacaacagctttgtcatcagcagcagcaactgcacaac
cagcaacttcatgtcagacaacaacaaacacagcagcaacaacaccgcccgtgtcatcaa
caacaagagcagcagcaccacagaatgcggcagcagctgcaacaacagcaaagtcatcag
caacagctgttaaaccaacgccagcaccaacaaattaacacacagactatgtccctgcag
caacagcagcatcataatttctccttccaccagggaggtcaatctcggagccaacagcaa
ggtcatcatactcagcagcaggttcagcaccaacttactgttggaggaccaaggttccat
tcaagggctatgccaagtaagtcttatttggatggtcaaaatgcttctctgagtgggact
tgcttgcaaccacagcagcagcagcagggtagctaccagctggccaggggaggtcaagcc
ttctctggatcaggatcggaagattctaacctgcccttccccatgcattcgtcatctatg
gttcactctctgcccacatgctcagccagttctgccactgcttaccaacctgctcaatac
ccttcctaccctggagagccagaaatgcccagtctcagtcagcagtctttgtccacagcc
tcagtgtctatgcccaccaccagcactgaacccctcacttctacagtgcctgagctctcg
gggacagtgtgtcagtttgcaaccacagctgttatgaggaccccggttagccaggcagag
gaatgccctttccgggccttacattgctctggggaaacacaggcaaactgcaagtcatct
gagatgtttggtgagtctatgaactgctaccctagcatagctagccagctgccctctgag
cagcctcagagctgcggggccatcaacactaatggatatcaagaattgggagacagtctc
ctgccatcagatgctcaggaggaagacttggggggcctggagtctcctgacctcctgcct
gacctactgccacagctggaggctgctctgagccagcaggatgaatccaactgttcttgg
gtcgattccagccatgaaaggggacatgagcacaagaaaccaccacctgttgaatgcaag
gaggaaaagcctcgaaagaacgctaatggtcccagtagccaggtacgggtcctcagtccc
ccattgaagagcagctcgtcgtcctcctcctcttcctcatcgtcctcatcctcatccagc
tccccatcggagaagaggacgccacggaggacgcatcatcagatggagtcaacctcacag
gacaagcaggagaaggccaataggataatatcagaggctattgcaaaggcccggcagcgt
ggggagaagaatattcccagagtcatgagccctgagagcttccccagctcttcttcacag
tacaagcaccgtaagcgtgagcacaaaggaagcggcaaagcacggcctaaggagaaggac
tgcaggaaggcctgtattgtaccctcttccaagcccaagcagaaggccaagattgggaaa
attgtcatcaagattgggaagaagaaaaagcgaaagccggagtcttcagaggagtcggat
gatgaccctccccctcgacacagttctaaagatgacgactctaagaggcgatctaatcgc
caggtgaagagaaagaaatacgctgaggagctggaggccaggttgtcggatgatgaggtc
aaggttattgtcaaagccaagaaaaccaacactgcagcatccaagcagcccgctgttcag
ctctttgtagagaatcccagtgaagaggatgctgctgttgttgacaaaatcatgtcttct
cgtatggtcaagaaggaggtctctccaggagtggtggtcgaaggggaggagttctttgta
aaatacaaaaactactcctacctacactgtgagtgggccacagagcagcagctggagaag
gacaagaggattcagcagaagatcaaacgtttcaagatgaaacaagcacagagggcactc
ttctttgcagatatggaagaggagccctttaaccccgactatgtagaggtagacagagtg
ctggaggtgtcgtattgtgaggacaaagacacaggagaggaggtggtgtattacctggtg
aagtggtgctctttgccttacgaggacagcacctgggagctaaaggacgacgtagatcag
agcaagattgaagagtttgagcagctgcaggcagtgaagccagactcgcgcagagcggag
cggcccccggccaatctgtggaagaagaaggagcagtcgagggaatacaggaatggtaac
agcctcagggactaccagctagagggggtcaactggctcctcttcaactggtacaacaga
cgaaactgcatcctggcagacgagatgggcctgggaaagaccatccagtccatcacattc
ctagaggagatccaccgtgtgggcattaaagggccattcctcatcatcgctccgctctcc
accatcgccaactgggagcgcgagttccgtacttggacccacctcaacgtcatcgtctac
catggaagcatggtcagcaggcagatgctccaacagtatgagatgtatttcagggacacg
cagggccgtgcgatacgaggagcctacaggttccaggccgttatcaccacgtttgagatg
atcctgggaggctgccctgaactcaatgccatagagtggcgctgtgttattatcgatgag
gcccaccgcctcaagaacaagaactgcaagctgctagagggcttcaagctcatgaacctg
gagcacaaggtcctgctgacaggtactcctctccagaacacagtggaggagctcttcagc
ctgctccacttcctggagccggcacgcttcccctcagaaaacacctttatgcaggagttt
ggagacctcaagactgaggagcaggtacagaagctacagggcatcctgaagccaatgatg
ctgcggcggttgaaggaggatgtggagaagaagttggctcctaaagaggaaaccatcatc
gaggtcgagctcaccaacattcaaaagaaatactaccgcgccatcttggagaagaacttc
tctttcctggctaaaggagctggccaggctaatatgcccaacctggtcaacaccatgatg
gagctgagaaagtgctgcaaccacccctacctcatcaaaggggcagaagagaagatccta
gaggacttcagggaggtgtatagccccactgccatcgactttcacctgcaggctatggtg
cagtctgccgggaagctggtcctcattgacaaactgttgcccaagatgaaggccggaggg
cacaaggtgctcatcttctctcagatggtgcgctgcctggacatcttggaagactacctc
attcagagaaggtacttgtatgagcgaattgatggacgtgttcgggggaacctgcggcag
gcagctatcgaccgtttcagtaagcctgagtcggagcgctttgtttttcttctgtgcaca
agagctggcggcctgggaatcaacctcacagcagcagacacctgcatcatctttgactca
gactggaacccgcagaatgacctgcaggcgcaggctcgctgccatcggatcggtcagaac
aaggcagtgaaggtgtaccgtctgatcaccaggaactcgtacgagcgagaaatgtttgat
cgcgccagcctcaagctgggcctggacaaagcagtgttgcagagcatgagtggccgagat
aacagcctgggaggaggcgccgggggaggggcagtgcagcagctgtcaaagaaggagatt
gaggatctgctgcgacgtggtgcgtacggggccatcatggatgaggaggacgaaggggcc
aaattctgtgaggaggacatcgatcagatcctccagcgcaggacaaagaccatcaccatt
gagtctgagggacgaggctccacttttgctaaggccagttttgtggcgtccggaaaccgc
acagacatctctctggatgaccccaacttctgggacaaatgggccaaaaaggctgacatt
gatatggagatggtcaacggcagaaacagcttggtgatcgacactcctcgtgtcagaaag
cagacgaggccattcagtgccaccaaggatgagttggcagagctttcggagggcaacagc
gacagtgacgacaccaaacctaagctcaggcgaaaccacgaccgcctcaacagctatgga
cgcacagagtgcttcagagtagagaagaatctgcttgtttatgggtggggtcgttggaag
gatattctcaatcatgggcgttttaagaagcaactgacggagagggatgtggagtccatc
tgcagggccctgttggcttactgtctggtccattaccgtggagatgacaagatcaaaagc
ttcatgtgggacctgattgcccccactgaggatggacgcaccaaggagctgcagaatcac
ctgggtttgtctgctccggtccctcggggcaggaagggtaagaagatgaagacccagtcg
agctcttttgacatccacaaagctgagtggctcaggaaacacaacccagagcacatgctt
caggacgacggctacaagaaacacctcaaacaccactgcaacaaggtgctgctcagggtc
agaatgctctactacctgaaacaagaggtgataggatcccaggcccagagggtgctagac
ggcgcagactcaagtgagataaagatctgggtgccagaccctgaccattcggagctgcca
gccttgtggtgggatgccatctcagacaagtgtctgctgctgggtgtctttaagcatggt
tatgagaagtacaacactcttcgtgcagacccaaccctgtgcttcctagagcgtgtggga
cgaccagatgagaaggccatcgctgctgaacagagaggcaacgatttcatggatggggat
gtggatgacccagagtacaagcctgctccagccctgctgaaggacgatatggaggatgac
gcctcctctcctggagacttggttgtcactgacaacgccggagatgtagttccagcgaca
agtgaaacttcttactggccctcaccctcggtgctgacagccaggctgaggcgactgatc
acagcctctcaacgctacaccaagagccggcagatcctccagatccaccagactcagact
cagtccccgtcgaccatgatactgtctgctccactctgtccgctgccccccacactgaac
gacaccctcaaccccaagatggctgcaaagattgaacggcaacaaagatggaccaggcga
gaagaggctgacttctaccgcgtggtctccactttcggtgttgtcttcgacccaaacctg
ggccggttcgactggaccaagttcagggccatggctcggctgcacaagaagactgacgag
agcctgcagaaatacctgtgtgcttttactgccatgtgccggagggtgtgccgtctgcca
cccaaagagggagactctgcagtggacccgtctctgaacatccagcccatcacagaggag
cgcgcatctcgtacactgtacagagtggaattgcttcgccaggtgagggaacaagtcctt
cgccatcagttactctacgagcgcctgccactgtgccagatgagctctgacttgcctgtc
tggtgggaggctggtactcatgaccgtgacctgctaattggagctgccaagcacggcgtc
agccgcactgattaccacattctgagagaccctgagctcagcttcatggctgcccaacgc
aactacagccaaacaaaaactgcacagcagcaatcacgcacatccaccccgcttctacac
tctcagtgccaggccaccagctcactgctgacaggctctccgctgcctccaactgcccag
agagaagcagagcctggtggggttgtacccaaagtggaaccagcctcaggaggagaggag
ggccaggagaagcagggggagagttggagccctccccgagcaccagctactcccacaggt
ctggaggagaagccagtgtctgagacgagggataatgagaggcagatggtggcagcacga
accaaacccctcacacccaactctactgagaggaaaccgaagaaggccagcaagaggagc
cgcagggagacgaggcgcggctcagactccgactcagatggctcctcctcaagctcttca
tcgcgctcctcttcttcctcatcatcatcatcctcttcctcgtcacattctgggtccagc
tcctcctcttcttcatcatcttgctcctctggctcttcatcatcatcgtcctcctcctca
tcttcttctgatgacagtgaaagtgagggagaggaagggaagaagaaggtggctgcagca
acaagtgtaaagggctttgatgaggacagtgtggcgtctctgagcactacacaggatgaa
acacaagacacccacacggcggagaacggcatcaccaacagctcctcgcatcctttccaa
ggaggagggtacatgctcgctgcatcctactggccaaaggatcgtgtgatcatcaaccgc
ctggacagcatctgccaggcagtgctaaagggcaagtggccaggaacacgtcgggtctac
gaacccggaggcgcagtggcctccttctacaccaccaagctgctggacaacgccaacagc
ctgtgcgaggacccctctgcctcaccacaggggtcaaaggtgaccaagcatgttgcagaa
aacaaggagttctcagtaaaactcaacgatcaggagggaggtctgaagctgaccttccag
aaacaaggtctacctctgaagaggcccctggagtcggaggagggcccacaggcccagcag
cagtacctggctcggcttcatgagctgcagagcgcctcggacacaggcctggccgacatc
accaagcctcagtgcagcttccagaccgggcctcctggtgttactggtcagatgaggctg
aacggagtactagatggccagccggtggttaagaggcgaagaggaaggaggaagaatgtg
gaggggatggacctgctcttcatgaataggagtagagtccctgctgttcctgatcaggtg
cctccagggtggggcggtattggccaggtgggcgtggctgcgggcgtggctgcgggcgtg
gctgcggccgcggtgccaggctacagccagagctccagtcaggcccctgcagacactgac
agcagggtccctgttatcaacctcaaagatggcacccggcttgctggggacgacgctccc
aggaggaaagatctagagcagtggctgttagagcaccctggctttgtggcagacacagga
gcttttatccctggggtaaataagatgcaaatgcagttccacttccaggatggtcggccc
aagcagaagaggcaccgctgcaggaacccaaacaagattgatgtgaacagcctgaccgga
gaggagagggtccagatcatcaacaggagaaatgctcgcaaggttggtggagcctttgct
cctcctctaaaggatctgtgcagattccttcaggagaacccagagtacggagtcccacct
gaatgggctgatgttgtcaaacagtcgggttacctcccagagagcatgtttgacaggatc
ctgactggacccatcgttcctgaggaggtgagccggcgtggacgtcgacccaagaaccct
ctggctaaggcagcggcggcggcggcggcggcagcggcagcagcacccaacccagcagcc
tccgccctgggtctgaaccccctgctggctaacggcctcctctctggaatggacctgacc
agcctgcaggccttccagcagaacctccagagcttacagtccctgcagctcactgcgggc
ctgatggggctgccgtctgatgctagcaacctggccgcaagtaacctcgctgccatgttt
cccatgatgctgtctggtatggctggattgccaaacctgcttggcatgagcggtttgatt
ggaaagcccgctcaggagggcacaggagtctctgaggagaagacaaagggaacctccagc
gttgtgacaggagagccgtctgcctctaaagccccctctcacacctcagacaccaaagga
gaaaggacagagggctcgaacacgactccttcctccacttccagctccacttcctccgtc
accgccccacaaagtgcttcagctgcctctgcagcctccagtcacccactgtctcttaac
cccttgttactctccagtatgctttacccagggatgcttctcactccaggccttaacctt
cctgtgtctgccacacagccgcagagctcaaacagtgaccccacccttcctcctgctcgt
cctcctccgcctgcagtctcccagtcatcaccacaggagacagagcagctagcagcagag
cgggacggagaggaggatgacgaggcattagaagacgaagaagaggaagaagaagaagaa
gaagaggaggaggactcagcagaacaaaaggagaacagtggtcctgaaggttcggggaaa
gctgagtcgtcttcatcagagtctgggagctcttcctcatcagacgattcagactccagt
gattag
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integrated database retrieval system
