Epinephelus lanceolatus (giant grouper): 117256425
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Entry
117256425 CDS
T07331
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117256425 (cxxc1b)
03036 Chromosome and associated proteins [BR:
ely03036
]
117256425 (cxxc1b)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117256425 (cxxc1b)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
117256425 (cxxc1b)
COMPASS/SET1 complex (yeast)
117256425 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
117256425
NCBI-ProteinID:
XP_033481731
LinkDB
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Position
7:complement(29933104..29939540)
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AA seq
571 aa
AA seq
DB search
MDSEMSDVDPAPGPETSSMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKM
AKAIREWYCMRCRDKNPSLEIKYRSKKSREKEVEVDRGSDKQYSTPSTPDYKSERRRGSK
VKRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKDE
ELSLQERRDNSYHRRRRYSEDYDSEAELYQQYKAAGLSNSLTWNSDEDDEPPFSPVMRKK
AVKVKHVKRREKKFDKKKESRRHKQKQKHKDRTRYSEKGELRDSTGLRQCLGPSCVEAAR
TNSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRREQQNARLRLT
DMERRFHELEGIIAKAKQQAVQQDEEVNEGDSEDTDLQIFCVSCSHPVNPKVALRHMERC
YAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPVDEVCG
CPLVKNVFELTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPVTTDLRSNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtctgacgttgaccccgcaccaggacctgagaccagcagtatggag
ggggagaacgcaccactgtactgtatctgcaggaaaccagacatcaactgcttcatgatt
ggctgcgataactgtaatgagtggttccatggccactgcattaacatcacagagaaaatg
gcaaaggcaatccgggaatggtattgcatgagatgcagagataaaaacccctcgctggaa
ataaagtatagatcaaagaaaagcagagagaaggaagttgaggttgacagaggatctgac
aaacagtacagcaccccgagtactcctgactataagagcgaaagacggcgtggatccaaa
gtgaagcgctcagtccgaatgtgtggggagtgtgagccctgcagaaggacggaggactgt
gcacagtgtgacttctgcaaggacatgaagaagtttggaggccccaacaaaatcagacag
aagtgcaggttcaggcaatgtgaggttcgggccaggaaaatgctgcgcgtgaaggatgag
gaattgtctttgcaagaaaggagggataattcctaccacaggcggagacgatactcagag
gactatgacagtgaggcggagctgtatcagcagtacaaggcagcagggctgagcaacagc
ttgacatggaatagtgatgaagatgatgagccgcctttcagtcctgttatgcgtaagaaa
gctgtgaaggtgaaacacgtcaagagacgagaaaagaagtttgacaagaaaaaggagtca
cgacggcacaaacagaagcagaagcacaaagacagaaccagatacagtgagaagggagag
ctcagagatagcaccggtctccgtcagtgtttggggccaagctgtgtggaggcagcaaga
accaactccaaatactgctccgaggactgtggcatgaagttagcagccaatcggatctat
gagatcctccctcagcgtatccagcagtggcaacagagtccctgcattgctgaggagcac
ggtaagaagcagctggagcgcatccgtcgggaacagcagaatgcccggctgcgcctcaca
gatatggagcgacgcttccacgaacttgaaggcatcatcgccaaggccaagcagcaggcg
gttcagcaggacgaggaggtgaatgaaggggacagcgaggacacggacctgcagattttc
tgtgtgtcttgcagtcatcccgtcaatccaaaagtagcactgagacatatggagagatgt
tacgcaaagtacgagagccagacttcctttggttccatgtaccctacaaggatagaaggt
gctaccagactcttctgtgatgtttacaatccccaaagcaaaacatattgtaagaggctt
caggttttgtgtccagaacattccagagatccgaagatcccagtggatgaggtgtgtgga
tgtcctctggtgaagaatgtatttgagctgactggagattactgcagggtctccaaaagg
aaatgcaacaagcattacaactgggaaaagcttaggagagcagaggtagacttggagcga
gtgcgggtgtggtacaagttggacgagctctttgaacaggagcgtaatgtcaggactgct
atgaccaacagagctggtctgctggctctgatgttgcaccaaactattcagcatgacccc
gtaacgaccgatctccgtagcaacaaggataggtag
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