Epinephelus lanceolatus (giant grouper): 117256599
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Entry
117256599 CDS
T07331
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117256599
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117256599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117256599
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117256599
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117256599
Multi subunit type E3
ERAD complex
117256599
LMBR1L-GP78-UBAC2 complex
117256599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
SVIP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117256599
NCBI-ProteinID:
XP_033482000
LinkDB
All DBs
Position
1:25398177..25410748
Genome browser
AA seq
623 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGVLETDETPAPPDVDLEHL
NNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLVHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDSGQARGPQQGGGLEDNIGPVGAAPDARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLLAMAHQVQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPSQVSTASDEQDPGSSGAAEQNLNESDN
MEVRGGRFSKSAEERQKMLKQRKEEMLQQARRRYLNKSPEDPDEDLPGLEEDTVPDLNMT
VLRRRTMAAAAERRMQNQQDPAP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttttggagaggtttccttggcccagcctgcagacctacacagcgctg
agtgtggctttgcttgctggcagcatctttagtgcctacaccactgtgactgatccgggg
tttggggtcttggaaacagatgaaacaccagctccccctgatgtggatcttgaacatctt
aacaatgacattagcaacacagaactggcaaccactgtcctgtggtatcttgtcacagac
agtctctttgtatgggtcttggtcaacacattctgctgctccttgatgttaattgctaaa
atgattcagtatgtggtgtttggcccgctcagggtcagtgagaagcagcacctgaaagac
aagttctggaacttcatcttctacaagttcattttcatctttggcgtgttgaacgtgcag
acagtcgaggaggtggtgatgtggtgtttgtggttctctgctctggtgtttctccacctc
atggtgcagctctgcaaagacagatttgaatatctgtctttctcgccctccactcccatg
aacagccatgtacgagtgctttgtctgctggtctccctgctgctggactgctgtggtctg
gctgtggtctgtggtctgctgggagcttcccatgggatgcacaccctctcctttatggca
gctgagtgtctgctggtgactgtacgcactgggcatgtcatcatgcgatactccattcat
ctgtgggatctgaaccatccagggacctgggagagtaaggggacatatgtctactacaca
gatttcatcatggagttggctatgctcttcctcgaccttgtgcaccacatccatatgctg
ctttttggaaacatctggctatccatggcaagcctggttatcttcatgcagctgcggtat
ctcttccatgaggtccagcgccgcgtccgccgacacaagaactaccttcgtgtcatcaac
aacatggaagccagatttgcagttgctacagcagaggagctggcagctaatgatgatgat
tgtgccatctgctgggacaccatgttgacagcacgcaaactgccctgtggccatctcttc
cacaactcttgtttgcgctcgtggctcgagcaggacacctcatgtccaacatgccggaca
tccctgaacatcaacggggacagcggccaggcaagaggtccgcagcaaggcgggggactg
gaagacaacatcggcccagtaggagctgctccagatgctcgaccacatatcaaccaacac
aatcacttcttccactttgatggatctcgcattgccagctggctgcccagtttctcagtg
gaagtaatgcacaccaccaatatcttgggcattgctcaggccaacaactcgcagctcctg
gccatggcccatcaggtccaggagatgttcccccaggtgccctcctacctggtgatgcag
gatctgcagctgacccgctctgtggaggtcaccactgacaacatcctggagggacgcatc
caggtgccttttccaacacaggccatagagcgtgccccttcacaggtgagcactgcatca
gatgagcaggatccagggtccagtggagcagctgagcagaatctcaatgagtcagacaac
atggaggtcagaggaggtcgcttctcgaagtcggctgaggagaggcagaagatgttaaag
cagaggaaagaagagatgcttcagcaggcacgcaggagatatctgaacaagagtccagag
gacccggatgaggatttgcctggactggaggaggacactgttcctgacttgaatatgact
gtgctgagacgtagaaccatggcggcagctgcagagagacgcatgcaaaaccaacaagac
cctgcaccctga
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