KEGG   Epinephelus lanceolatus (giant grouper): 117256688
Entry
117256688         CDS       T07331                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03013  Nucleocytoplasmic transport
ely04141  Protein processing in endoplasmic reticulum
ely04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117256688 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117256688 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    117256688 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ely03019]
    117256688 (sec13)
   04131 Membrane trafficking [BR:ely04131]
    117256688 (sec13)
Messenger RNA biogenesis [BR:ely03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117256688 (sec13)
Membrane trafficking [BR:ely04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    117256688 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    117256688 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    117256688 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_EML
Other DBs
NCBI-GeneID: 117256688
NCBI-ProteinID: XP_033482148
LinkDB
Position
1:complement(48648534..48655109)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGAWDKMYEYCGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgttattaacacggtggacacctctcacgaggacatgatccacgacgcccag
atggattactacggtactcgactcgccacctgctcctccgaccgcactgtaaaaatcttt
gatgtcagaaatggagggcagatccttgtagcagacctcagaggccacgagggtcctgtg
tggcaggtggcgtgggctcacccgatgtttggcaacattctggcttcctgttcttacgac
cgtaaagtcatcatctggaaggaggagaacggagcctgggacaagatgtatgaatactgc
gggcacgagtcatcggtaaactctgtctgctggggtccgtatgactttggtctgatcctg
gcctgcggcagctcagatggagccatttcccttctcacattcactggtgatcagcagtgg
gacgtcaagaagatcagcaacgcacacactattggttgtaacgcagtgagctgggctcct
gctgtagttccaggcagcctgattgatcagccgtcaggacagaaaccaaactacgtcaaa
cgcttcgtctccggaggctgcgacaaccttgtcaagctctggaaagaggaggacggtcag
tggaaggaggaccagaagctggaggctcacagtgattgggtgagagacgttggctgggct
ccttctattggtcttcccaccagcaccatcgccagctgctcccaggacggacgcgtgttc
atctggacgtgtgacgacccagcgggcaacacctggacggccaaactgctccacaagttc
aatgatgtcgtttggcacgttagctggtcgatcaccggaaatatcttggcagtttctgga
ggagacaacaaggtgacgctgtggaaggagtcgatggacggtcagtgggcgtgtatcagt
gacgtcagcaagggccagggcgccgtctccaccatcacagacacacagcagaacgagcag
tga

DBGET integrated database retrieval system