Epinephelus lanceolatus (giant grouper): 117256708
Help
Entry
117256708 CDS
T07331
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03083
Polycomb repressive complex
ely04980
Cobalamin transport and metabolism
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117256708 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117256708 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117256708 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117256708 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117256708 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117256708 (hcfc1a)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117256708 (hcfc1a)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117256708 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
117256708 (hcfc1a)
MLL-HCF complex
117256708 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117256708 (hcfc1a)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117256708 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
117256708
NCBI-ProteinID:
XP_033482175
LinkDB
All DBs
Position
7:30001982..30017728
Genome browser
AA seq
1713 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSATPVQ
PLNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTVKMASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSSSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTSLTSASALPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATMGAEKVCSNPPCETHETGTTNTATTSSATIKAGQVCSNP
PCETHETGTTNTATTASSNMSTPRVCSNPPCETHETGTTNTATTASANMGGVQQICSNPP
CETHVTGTTNTSTQASSNMNAGQTNTVQRVCSNPPCETHETGTTNTPSTATSSMGGDQTS
TATGQVQRVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEATEGTSSTEVASTT
AATGMVTTTQGRAITTVTQSTPAPGPSVPSISSITESVSTAASSTEEPMQTDETASAEAA
PAVEGATAMETQAEGEAATATALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVMNEGDSTGESQQPTNIPIMLTQQELAALVQQQQQLQLQ
EAQAAAQQASVDTNLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLA
PSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGIVKV
TNMVVTHFYVPGDDSQGDDDSGIMPDYSQMKKMELQPGTAYKFRVAGINACGRGAFSEIS
AFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKAST
PAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE
SGKDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctgggtccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcggatggtccggtcccgttccccggcccagacatggtcacagagctgtg
gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggatgaatta
catgtatacaacactgcaacaaaccagtggtttatcccagcagtccgtggtgatattccc
cctggttgtgctgcatatgggtttgtctgtgatggcacaagactgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgacctctatgaactacaggccagcagatgggaa
tggaaaaagttgaaagcaaaaaacccgaagaatggcccccctccttgtcctcgacttggt
cacagtttttccctggttggcaacaaatgctacctgtttggtggactagccaatgacagt
gaggacccaaaaaacaacattcccagatacctgaatgatctgtacacacttgagcttcgt
gcgggttccagtgtggttggatgggatattccaatcacatatggagttctgcctcctccc
cgtgagagccacactgctgtggtatacacagaaaagacgagcaggaaatctcgcctgata
atctatggagggatgagcggttgtcgccttggagatctgtggactctcgatattgatacc
ctgacatggaacaaaccatcagtaagtgggactgcaccgctccccagaagtcttcactct
gccaccaccatcacaaacaagatgtatgtttttggagggtgggttccactggtgatggac
gatgtcaaagtggccacacatgagaaggagtggaagtgcacaaacactcttgcctgccta
aatctagactccatgtgctgggagacagtgttgatggatactctcgaagacaacatccct
agggcccgtgctggccactgcgctgtggccatcaactccagactctacgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctg
gaaacagagcgaccacacgcccctgctagggtgcagttagtccgtgccaacacaaactct
cttgaggtgagctggggcgccgtctcaactgctgacacctacttactgcagctgcagaaa
tatgacatccctgcaactccagctgcagcctcgccagccatgagtgccacccccgtgcag
cctctgaactctccaaagagccccgcaccggctgctgcagcaccctctgctcaaagccta
ccccagacagctgttttgaaggttgccgctcaacagtctgccacaggcacatctgttgtt
acagtccgccccagccagcctgggaaatcccccgtcactgtgacatctcttccgccaggt
gttcgaatggtagttcctgcccaaaccacccaaggatcgccaattggaagtagccctcag
atgagtggcatggcagctttagcagcagcagctgcagcaacacagaagatcccaccttcc
tctgctggcactgtcctcaatgttcccgcaggtgccacaattctcaaaacagtagccgtt
tcccctggcacaaccacagtgaaaatggcctccccagtcatggtcagtaacccggctacc
cggatgctgaaaactgctgcagcccaggtgggcacagcaactgcgtcctctcccaccacc
accagacccatcatcactgtgcacaagtccggtgcagtcacagtggcacagcaggcccag
gtggtaaccactgtggttggaggagtcaccaagaccatcaccttggtcaagagtcccctc
accatgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtcacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagccggcaccatcctgaagctggtgacctctgca
gatggcaagcccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaagccc
acaatcctcaacatcagcggtgtctctcctaccaccactaagcaaggcaccaccatcata
aagaccatccccatgtcggccatcatgacacagcctggagccacaggtgtaacaagcagt
gcaggcatgaaaacgcccatcacaatccttaccacaaaggtgatgaccactggaacgcct
ggtaaaatcatcactgcagtgcccaaacttgccactgccgctggccaacagggactgaca
caggtggttttgaagggtgctccagggcagcctggcactattttgcgcactgtgcccatg
agcacagtcggtggtgttcgacttgttacaccagtgacagtgtctgctgttaagcccact
gtcaccactctggttgtcaaggggactactggtgtcaccactcttgggacagtcactggc
acagtctcctcaagcctggcaggaggcacggtggacagttccaatgcctctctggtcacc
cccatcaccacactgggaaccattgctaccctgtccagccaggtcatcagcccagctgcc
ataactgtgtcagctgctcagaccagcctgacctctgcctccgcattgccctcctctacc
atgacagtgcagaaccagcccacccaggtgactctgatcacaactcccagtggtgtagaa
gctcaaccagtgcaggatctcccagtgtccatcctggcttcaccaacctccgagcagccc
agctccactgaggctggagcagctggagaaggctctgggaccgtcaccctagtctgctct
aacccgccctgcgagacccatgagaccggaaccaccaacacagcaaccacctcttctgcc
accatgggagcagaaaaggtctgctctaacccgccctgcgagacccacgagaccggaacc
accaacacagccaccacctcctctgctacaattaaagcaggacaagtgtgctctaacccg
ccatgtgagacccatgaaacaggcaccaccaacacagccacaactgcatcatcaaacatg
tctacgccgcgtgtgtgctccaatccaccatgcgagacccatgaaactgggacaactaac
acagcaaccacagcatcggctaatatgggaggagtccagcagatttgctccaacccaccc
tgtgagacccacgtgaccggcaccaccaacacatccacccaggcatcatctaacatgaat
gcaggccaaacgaacaccgtgcagagggtttgctccaacccgccctgcgaaacacacgag
acagggaccaccaacaccccgtccacagccacctccagcatgggaggtgaccagaccagc
acagctacaggccaggtccagagggtttgctccaacccaccctgtgaaacacacgaaacc
gggaccaccaacacagccaccactgccacctgcagcatggagacaggcgaaggcacagca
gcccagcagacagaggaggcaacagaaggtaccagcagcacagaagtggcctccaccact
gcagcaactggcatggttaccaccacccagggcagggccatcacaactgtcactcagtcc
acaccagctcctggaccctctgtaccttcgatctcatcaatcacagagagtgtgagtact
gctgccagctccacagaggaaccgatgcaaactgatgagacggcatcagcagaagctgca
cctgcagtggagggagccaccgcgatggagacgcaagcagagggagaagcagccacagct
acagccttgaatctgccctcagagctgatgtccgagggtcagggtgccacactcatggtg
acagggctgtcggacgaggagctggctgttactgcagcggcagaggctgctgctcaggca
gcagctactgaagaagcccaggctctcgctatccaggctgtgctccaggcagcccagcaa
gccgtaatgaatgaaggtgattctactggagagagccagcaacccaccaacatccccatc
atgttgacccagcaggagctcgcagcgctggtccaacagcagcagcagctgcagctgcaa
gaggctcaggctgctgcacagcaggccagcgtggacacaaacttgcccactgaaggtctc
gcccctgctgacagcctcaacgacccttctgtcgagagcaacggacacaatgagatggct
gccgcagtcaccagtgcagtggcatcactgctgccacgcaccactgctgagacactcgct
ccatcaagcacatttgcaccctctgtatcagtggcaagtccagccaagctgcaagcagca
gccgcactagcagaggtcgccaacgggattgagggagagaagcaagcccctcagccaacc
cccgtgaagcctgttgtaaaaaaagagaaccagtggtttgatgttggaattgttaaagtg
acaaatatggttgtcacacacttctatgtgccaggagatgattctcaaggagatgatgac
tctggcatcatgccagactacagccagatgaagaaaatggagctgcagcctggaacagct
tacaagttccgtgttgcaggaatcaacgcttgtggtcgcggagctttctccgagatttct
gctttcaaaacttgcctaccaggcttcccaggggcaccctgcgccatcaaaatcagcaag
agcccagatggcgcccacctgacctgggagccaccctcagtgacgtcggggaagataatc
gaatactctgtgtacctggctatccagagcaaccagacagctgaagccaaggcctccacc
ccggcacaactagccttcatgcgtgtgtactgtggacccaacccctcttgcttggtgcag
tcgtccagcctctccaacgcccacatcgactacaccaccaagccagccatcatcttccgc
atcgccgcccgcaatgagaagggctacggtcccgccacccaagttcgatggcttcaagaa
tccggcaaagatgctgcctctgcaaaaccggcccccaaaagaccaggcacctctcctgat
actaaggctactggtccaaagaaagcaaggacggaccagtga
DBGET
integrated database retrieval system
