KEGG   Epinephelus lanceolatus (giant grouper): 117256857
Entry
117256857         CDS       T07331                                 
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03020  RNA polymerase
ely03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117256857 (polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117256857 (polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ely03021]
    117256857 (polr2j)
   03400 DNA repair and recombination proteins [BR:ely03400]
    117256857 (polr2j)
Transcription machinery [BR:ely03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     117256857 (polr2j)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117256857 (polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 117256857
NCBI-ProteinID: XP_033482475
LinkDB
Position
7:complement(241122..241966)
AA seq 77 aa
VCVCVCVSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSL
LEERFRVAIKDKQEGIE
NT seq 234 nt   +upstreamnt  +downstreamnt
gtgtgtgtgtgtgtgtgtgtcagtcagctgttgaaggatcctcaggttctgtttgctggt
tataaagttcctcatcctctggaacacaagatcgtcatcagggtgcagaccacacctgac
tacagcccacaggaagcatttacgaatgccatcactgacctcattagcgagctctctctg
ctggaggaacgcttcagagtcgccatcaaggacaaacaggaagggattgagtga

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