Epinephelus lanceolatus (giant grouper): 117256862
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Entry
117256862 CDS
T07331
Symbol
ddx27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117256862 (ddx27)
03009 Ribosome biogenesis [BR:
ely03009
]
117256862 (ddx27)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117256862 (ddx27)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117256862 (ddx27)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
Helicases
117256862 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Myb_DNA-bind_4
Cas3-like_C_2
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
117256862
NCBI-ProteinID:
XP_078028184
LinkDB
All DBs
Position
1:53165360..53200906
Genome browser
AA seq
801 aa
AA seq
DB search
MSEDKTTENLHRTRLEASTVRCAGPGPQSAMLEQLGLIGTIRDEDESPEEPDTESEQEDE
PIVLNRKKKFGSRGAKDFNADFEFGERDGLIHDEDWAMADVMKQLKNKRTATTLDQKIEK
IRKKRKAEEKSAQSDTAEGFAGKNQEEDEEQDEEQDVKPAVAEADGGSDDDEEQEDDEEE
DEFDSSDEEILTKSDTLRDKERRGKKRKVGEEAAESFYEDASQYDDQLTFDDMNLSRPLL
KAITALGFKQPTPIQKACVPVGLLGRDLCACAATGTGKTAAFMLPVLERLVYKPRTSQVT
RVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEAALRAGPDVLIATPGRL
IDHLHNTPSFELTHIEILILDEADRMLDEYFEEQMKEIIRLCSYNRQTMLFSATMTEEVK
DLAAVSLKQPIRIFVNSNTDVAPFLRQEFVRIRQNREGDREAVVAALLTRTFQDHVMCFT
QTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDDQIDILVATDVAARGLDID
GVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERKMLKEVVKSAKSSVKARV
LPPEVILKFRDLISKLEKDVDAVMKLEREERELAASEAKLSVAQKRLDGSVSSSQSQRVW
FQTQQERKQSRMSKALQEFDLALRGKKKRDKFVNDSRKKELTSEERAQFEILKAQMFAER
AAKRERRPKRARAMPDDETPTKPANQKAGKGGKKSVFDKELTNTNSKALRQYRAGPSFAD
RKRLGLDRKRSGNSRFNKTRK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagacaaaacgacagagaacctccacagaacccgtttagaagcgtccacagtc
cggtgtgcaggtcctggtccacagtccgccatgttggagcagctgggtctgatcgggacg
atccgggacgaggacgagagtccggaggaacccgacaccgagtccgagcaggaggatgag
ccgattgtcctgaacaggaagaagaagtttgggagtcgtggggcaaaagacttcaatgct
gactttgagtttggagagagagacggactgatccatgacgaggactgggcgatggctgac
gtcatgaaacagctgaagaacaagagaaccgcgaccactctggaccagaaaatcgagaaa
atcagaaagaagaggaaggctgaggagaaatcagctcagagtgacaccgctgaaggtttt
gcagggaagaaccaggaggaggatgaagagcaggatgaagagcaggatgtgaagcctgct
gtggcagaggctgatggaggtagtgatgatgatgaggagcaggaggatgatgaagaggaa
gatgagtttgattcgagtgatgaagagattctgaccaaatcagacaccctgagagacaaa
gaacgacgggggaagaagaggaaggtgggagaggaggctgcggagtcgttctacgaagac
gcgtctcagtacgacgatcagctgacctttgatgacatgaacctgtcccgccccctcctc
aaggccatcacagctctgggcttcaaacagccgactcccatccagaaggcctgtgttcct
gtgggcctgctgggcagagacctgtgcgcctgtgctgccactgggacagggaagacggca
gccttcatgctgccggtgttggagcgtttggtttataagcccaggacatcccaggttacc
cgggtcttggttctcgttcctaccagagagttggggatccaggttcactctgttgcccgc
cagctcgcccagttcacctccatcaccacctgcctggctgtcggtgggttggacttgaag
tctcaggaggcggcattgagggcggggccagatgttctcatagctacacctggtcggctg
attgatcaccttcacaacacgccaagctttgagctgactcacattgaaatcctgatcctg
gacgaggccgacaggatgttggacgagtactttgaggagcagatgaaggagatcatcagg
ttgtgttcctacaacagacagaccatgctgttctccgccaccatgactgaggaggtgaag
gatctggcggcggtctcgttgaagcagccaatcaggatctttgttaacagtaacactgat
gtcgctccttttctgcgacaagagtttgtccgaatccgacaaaacagagagggagaccga
gaggccgtggtggcagctctactgactcggacgttccaggatcacgtgatgtgtttcact
cagacaaggaaacaggctcacagattgcacatcctgctgggactgatgggactgaaggtc
ggagaactgcatggagaactgagccagaaccagagactggagaacctcaggcggtttaaa
gacgatcagattgatatcttggtggcgacagatgtagcagccagaggtctggacatcgac
ggagtgaaaacggtgataaacttcaccatgccatccacagtgaagcactacgtccaccgt
gtcggccgcacggcgagagcaggtcgctcaggacggtcggtgtctctggttggagagtct
gagaggaagatgctgaaggaggtggtgaaatcagccaagagcagcgtgaaggctcgtgtc
ctgccaccagaggtcatcctgaagttcagagatctgatctccaaactggagaaagacgtg
gatgctgtgatgaaactggagagagaggagcgagagctggctgcgtctgaggccaagttg
agtgtggctcagaagcgcctggatggctccgtctcttcttctcagtcacagcgagtttgg
tttcagactcagcaggagaggaaacagagccgcatgtcaaaggctctgcaggagttcgat
ctcgctctgagggggaagaagaagagagacaagtttgttaatgacagcaggaagaaggag
ctgacgtctgaggagcgcgctcagttcgagatcttgaaggctcagatgttcgctgaacgg
gcggccaagagagagagacgaccaaagagagcgcgagcgatgccggacgatgagacgccg
actaaaccagccaatcaaaaagcaggaaaaggagggaagaagtctgtgtttgacaaagag
ctgaccaacaccaacagcaaggctttgagacaatacagagctggaccgtcctttgcagac
aggaagcgtcttggcttggacaggaagcgttcaggcaattccagatttaacaagacgagg
aagtga
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