Epinephelus lanceolatus (giant grouper): 117256923
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Entry
117256923 CDS
T07331
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117256923 (chd5)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117256923 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
PHD-1st_NSD
ResIII
HDA2-3
Chromo
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117256923
NCBI-ProteinID:
XP_033482552
LinkDB
All DBs
Position
7:11594850..11663625
Genome browser
AA seq
1874 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPLTPLDIFSDNDSLKQQKKKKPKKMKE
GKMPKVKKRKKEGGIQPRIDSDLEETSEVEEERERPEIGSESESSAYGPTKKKKKKPKEK
KEKKPRKKKRDDEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSSSQPSSQLGPIKKAKTKEGKGQGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMLVHVLS
ANIFDKDGDVHYMIKWRDLPYDQCTWEVDDFDVPEYDSHKSSYWDHREQILGEDQRPLVV
RKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQG
TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVV
TYTGDKDSRAIIRENEFTFEDSAVKTGRKVFRMKKDTPIKFHVLLTSYELITIDQAILGS
ITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERF
NNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKK
YYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNL
LVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGL
RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIG
QNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTE
ELFKDEMEAARTMGDNKEGEEGNVIHYDDDAISKLLDRSQDATEDTEIQNMNEYLSSFKV
AQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVN
YNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKNEKDKPLPPLL
ARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEREFRAYVSLFM
RHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKLSSPDLIPI
GMELKKLTESLSSDPNTPVPASPVATQPGTPIPPEKTESLLGTAEDKETTEQDSKKSSEQ
ESSSAEPASVPEKASDGEESKTSSEEKTGDERDAAESPSAKSEPSANSKESALKQTELPS
SQPSPKMEPCKETEKGDSDSPQAKTEDKENKPAIADDMKSEDTLEGRLNGDKDTLDEMDE
SRKEDKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHRRHDYWLLAGIVT
HGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAA
YLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD
MKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFSQGGFGCSQMYSSS
FGGGFRGPGGQPMVNYSQMPLGPYVSDLHPYSVSSNGPPPPSSHLDKKSLDSLRDVATPD
LKSGKPSDVICIED
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgatgaaggtgagcgcaacactgttcccctcacacccctcgacatc
ttctctgacaacgactccctcaaacaacaaaagaagaagaagcccaaaaagatgaaagag
gggaaaatgcccaaagttaagaagaggaaaaaggagggaggaatccagccaaggattgac
agcgacctggaggagacctcagaggtggaggaggaacgggaacggccagaaataggctca
gagagtgagagcagcgcgtacggcccaaccaaaaagaagaagaagaaaccgaaagagaag
aaagagaagaagcccaggaagaagaagagagatgatgaagatgatgatgatgacgatgat
gatgggaacatgaaagaacctaaatcatccagccagttgatgcaggagtggggtctggaa
gacgttcagtacggcttcacggaggacgactacaaaaccatcacgaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgagagttcagtgccaacaacccgttcaaaggcgca
tctgccaccgctgtggctgctgctgtggctgccgccgtggaaacggttaccgtggcacag
ccgacatctgtcagcagcagccagccgagctctcagctggggccaatcaaaaaagccaaa
accaaagagggaaaggggcaaggagttaggaagagaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaagaaa
gcatcctcgagcgaggaggacttcctggaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaagatggtgatggttatgagacggaccaccaggactactgt
gaggtttgccagcagggcggagagatcatcctgtgtgacacctgtcccagagcgtaccac
ctggtctgtctggaccctgagctggagaaggcccccgagggcaaatggagctgtccacac
tgtgagaaagagggcatccagtgggaggccaaagacgaggaggaagaagaggaggagcca
gcaggcgaggaagaggacgaccacatggagttttgccgagtgtgtaaagatggaggggag
ttgctgtgttgcgacacctgcccatcttcctaccacatccactgcctcaacccacctctc
cccgagatacccaacggggagtggttgtgtccacgctgcatgttggtccatgtcctatca
gctaacattttcgataaggatggcgatgtgcattacatgatcaagtggagagacctgccc
tacgaccagtgcacctgggaggtggatgacttcgacgtcccagaatatgacagtcataaa
tcgtcttactgggaccacagggagcaaatactaggggaggaccaacgccccctggtggtg
aggaaaggaaagaaactcaaagacgaccatccaaagagggaggtccctcctgatgctcct
atcatagatccaaccatcaagtttgagcaccagccgtggtacattaacgccactggggga
acactgcacccgtatcagcttgaaggcctgaactggttgaggttctcgtgggcgcagggc
acagacacaatcctggccgatgagatgggcctcggaaagacggtgcagacaatagtgttt
ctctactcactctacaaggagggtcactctaaggggccattcttggtgagtgcgcccctc
tccactatcatcaactgggagagggaatttgagatgtgggctccagatttctacgtggtg
acatacactggagacaaagacagccgggcaatcatcagagagaacgagttcacctttgaa
gacagtgcggtgaaaacgggacgcaaggtgtttcggatgaagaaagacactccaatcaag
tttcacgtgctgctgacctcttacgagctgatcactatagatcaagccattctgggctcc
atcacctgggcctgcctggtggtggacgaggcccacagactgaaaaacaaccaatcaaag
tttttcagaattctcaacgggtataagatctactacaagctgctgctcactgggactcct
cttcagaacaacctggaagagctgttccacctgcttaacttcctcaccccagagcgcttc
aataaccttgaaggcttcctggaggagtttgctgatatctccaaggaggaccagatcaag
aagctgcacgacctgctcggccctcatatgctcagaaggctcaaagccgatgtcttcaag
aacatgcctgcaaagacagagttgattgtcagagtggagctcagccccatgcagaagaaa
tattacaagtttattttgacgcggaattttgaggctctgaactccaaaggcggagggaac
caagtgtccctgctcaacattatgatggacctgaagaagtgctgcaaccatccctacctg
ttccccgtggctgctgtggaagctcctgtgctacccaacggctcgtacgatggcaaccta
ctggtgaagtcctcaggaaaactgacactgcttcagaaaatgctgaagaaactcaaagat
gagggacacagagttctcattttctctcagatgacaaaaatgttggatctacttgaggat
tttctggagttcgagggttataaatatgaacgtattgatggaggaattactggaggcctc
aggcaggaggccattgaccgcttcaatgcaccgggcgctcagcagttctgcttcttgctt
tcaacgcgagccggaggtctcggcatcaacctggcgagcgcagacactgtcatcatctac
gactctgactggaatcctcacaatgacatccaagcttttagtagagcccatcgtataggt
caaaacaggaaggtgatgatctatcgatttgtgacgcggggctcagtggaggagcgaatc
actcaggtggcgaagaggaagatgatgctgacccatctggtggtgcggcccggcctgggc
tccaaaactggctccatgtccaaacaagaactggatgatattctcaagtttggcactgag
gagcttttcaaagatgagatggaggcagcacgaaccatgggtgacaacaaagagggcgag
gagggcaacgtgattcactacgacgatgacgccatttcgaagctgctggaccgcagccag
gacgccactgaagacacggagatccagaacatgaacgagtacctgagctccttcaaggtg
gctcagtatgtggtgaaagaagaggatggagaggaggaggtggagcgggagatcatcaag
caggaggagaacgtggatccagactactgggagaagctgctccgccaccactacgagcag
cagcaggaagatctggcccgcaacctcggcaaaggcaaacgcatccgaaagcaggtcaac
tacaacgatacgacccaggaggatcaagagtggcaggatgatctttcagacaatcagtcg
gagtactctgtggggtccgaggacgaggacgaagatttcgaggagaggcctgaaggcgga
cgcagacagtctcgccggcagctgaagaatgagaaagacaaacctttgccacccttactg
gcacgagttgggggcagtattgaggtcctggggttcaatgctcgccagaggaaagccttc
ctcaatgccatcatgcgctggggcatgcctcctcaggatgccttcaactcccattggctg
gttcgagacctgagagggaagagtgagcgcgagttcagggcctatgtgtctctgttcatg
agacatctgtgtgagccgggggcagacggagcagagacctttgctgacggagtcccacgt
gaaggactgtctcgtcagcatgttctaaccaggatcggcgtcatgtcccttgtcaggaaa
aaggtgcaagagtttgagcatgtaaatggaaagctgagctctccagatctgattcccatc
ggcatggagctgaagaaactgactgagagtttatcttctgatcccaacacccctgtgcca
gctagccctgtcgctacgcagcccggaactcccatcccaccagagaagactgagtctctc
ttgggcactgctgaagacaaggagaccacagagcaagatagcaagaaatcgtcagagcag
gaatcttccagtgcagagccagcatctgtacctgagaaagcatctgacggcgaggagagc
aagaccagctcagaggagaaaacaggagatgagagggacgcagctgagtccccctctgca
aagtcagagccatctgccaactccaaagagtccgctttgaaacagacagagctaccatcc
agtcaaccctcacctaaaatggagccctgcaaagaaacagaaaaaggagatagtgattct
cctcaggcaaaaactgaagacaaggaaaataagccagccattgcagatgatatgaagagt
gaggatacattagagggtcgattaaatggagacaaagacactttggacgagatggatgag
agcaggaaggaggacaagaacggatacaaagccaagtttatgttcaatatcgctgatgga
ggtttcacagagttgcacaccctctggcaaactgaagaacgagcggcgttgtcttctgga
aagatgcatgacatctggcaccgtcgccatgactactggcttttggctggcatcgtaaca
catggctatgctcgttggcaggacattcagaatgacccacgttacgccattctgaatgag
cccttcaagactgagatgcataagggcaactacctggagatgaagaacaagttcctggct
cgccgctttaagttgttggagcaggctctggtgattgaggagcagttgaggcgggcagct
tacctgaatatgacccaggaccccagccacccggccatggctctcaacactcgcttcgcc
gaggtggaatgtctggcagagtcccaccagcacctgtccaaagagtctctggccgggaac
aagcctgcaaacgccgtgctccacaaagtgctgaaccagctggaggagcttctgagcgac
atgaaagctgatgtgacccgactgcccaacatgctgtccaggatcccgccggtgtcggcc
cgcctgcagatgtctgagaggagcatcctgagccgcctcaccagccgagggagcgagcct
ccgcctcagcagccttttagccagggtgggttcggctgctcccagatgtacagcagcagc
ttcggtggagggttcagaggaccgggtggacagcctatggtaaactacagtcagatgcct
ctgggaccctacgtcagcgacctacatccttattcagtgtcctctaacggccctccaccc
ccttcaagccatctggacaagaagtcactcgactccttgagagacgtagcgacccctgac
ctcaagtcaggcaaacctagtgatgtcatctgtatcgaggactag
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integrated database retrieval system
