Epinephelus lanceolatus (giant grouper): 117256952
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Entry
117256952 CDS
T07331
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely00260
Glycine, serine and threonine metabolism
ely00630
Glyoxylate and dicarboxylate metabolism
ely00670
One carbon pool by folate
ely01100
Metabolic pathways
ely01200
Carbon metabolism
ely01230
Biosynthesis of amino acids
ely01240
Biosynthesis of cofactors
ely04981
Folate transport and metabolism
Module
ely_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117256952 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117256952 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117256952 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117256952 (shmt2)
Enzymes [BR:
ely01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117256952 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
117256952
NCBI-ProteinID:
XP_033482585
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Position
7:complement(19691715..19725970)
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AA seq
552 aa
AA seq
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MSSQSPTTPISPCGRISVTSRCQQLQTALSEPVSGVSPGCAASSSGLRPTNMLSFAIRQL
TRPLCQRAPLRLSVRCQQSHAAIRAADEDRAWTGQESLSQDDPEMWDLLIKEKDRQCRGL
ELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKRALEAFDLDP
ALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIYFE
SMPYKLNTATGLIDYDQMELTAKLFRPKLIIAGTSAYARLIDYARIKKLCTDIKAYMLAD
MAHISGLVAAKAIPSPFDHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKKGKEIMYDLE
DKINFSVFPSLQGGPHNHAIAGVAVALRQANSPMFKEYIAQVLKNAKSMAKALLSKGYTL
VSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGAPALT
SRQFKEADFVQVVEFMDEGFKIALDVKKKTTKLQDFKNFLLQDPETVARIADLRHRVEAF
ARPFPMPGFHDH
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacaaagccctacaactcccatcagcccttgcggcaggataagcgtaaccagc
cgttgccaacaacttcaaacagccctttcggagcctgtcagcggtgtgtcgcctggctgt
gctgcttcttcatctggcctgagacctacaaacatgctgtccttcgctatcagacaactc
acacggccactgtgccagcgagccccacttcgtctcagtgtacgttgccagcagtcgcat
gccgccatccgtgcagcggatgaagatcgtgcatggacaggccaggagagtctgtctcag
gacgaccctgagatgtgggatctgctgataaaggagaaggacaggcagtgccgcggtttg
gagctcattgcatctgagaatttctgcagtcgagcagctctggaagctcagggctcctgt
ctgaacaacaaatactccgaaggctacccagggagaagatactatggtggagcagaagtg
gtcgaccaaattgagctgctgtgtcagaaacgagccttggaggcctttgacctggaccca
gctctgtggggcgtcaacgtgcagccatactctggctcccccgctaacttcgccgtctac
accgctgtgctaaacccccatgaccgcatcatgggcctggacctgcccgatggaggacat
ctgacccatggctacatgtccgatgtgaagaggatctctgcaacctcaatctattttgag
tccatgccttacaagctaaatactgcaacaggacttatagactacgaccagatggagttg
acggccaagctgttccggcccaagctcatcatcgctggcaccagtgcctatgcccgcctc
attgactacgcccgcatcaagaagctgtgtactgacattaaggcctacatgttagctgac
atggctcatatcagtggcctggtggcggccaaagccatcccctctcccttcgaccatgct
gacctggtcacgtctaccacacacaaatccctccgaggagccagggctggcctcatcttc
tatcgtaagggcgttcgctcagtggacaagaaggggaaggagatcatgtacgaccttgaa
gacaagatcaacttctccgtcttcccctccctgcagggtggacctcataaccatgctatc
gctggtgtggctgtggcgctcaggcaggcaaattctcccatgttcaaggagtatatcgct
caggtactaaagaatgccaagtctatggccaaagctctcctcagcaaaggctacaccctg
gtatcaggtgggaccgacaaccacctggtcctggttgacctgcggcctaagggcattgac
ggagctcgggccgagagggtgctggagctggtgtcaatcactgccaataagaacacctgc
cccggggacaagagtgccctgactcctggtggcctcaggctaggtgctccagctctgaca
tccagacagttcaaagaggctgactttgtgcaagttgtcgagttcatggatgagggcttt
aagatcgccttggacgtcaagaaaaagacaacaaagctccaggacttcaagaacttcctt
ctccaggacccagagaccgtggctcgcatcgccgacctgcgccaccgcgtcgaagccttt
gccaggccctttcccatgccaggcttccacgaccattaa
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