Epinephelus lanceolatus (giant grouper): 117257078
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Entry
117257078 CDS
T07331
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117257078 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117257078 (taf4a)
03036 Chromosome and associated proteins [BR:
ely03036
]
117257078 (taf4a)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117257078 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
117257078 (taf4a)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117257078 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TMP_3
DUF5896
Motif
Other DBs
NCBI-GeneID:
117257078
NCBI-ProteinID:
XP_033482850
LinkDB
All DBs
Position
7:complement(30984821..31000143)
Genome browser
AA seq
857 aa
AA seq
DB search
MDASTASTDSTTGHDPGKTLAGSDGATSVPNHQGKVGSYSVQTFNGSQTMNSHNSGSAAP
LGGAAVTSGTGNSSSTAITVTAVNSGPVMSKGLASAIMHPSSNSVIQTPLMNSQSVVASA
PSVSQAAGPTVTLVRPPMQTAGSGATLNGNNNVSHAVVANTTGHTGIGIQTPLVNNSQPS
NSVSVSAGSHIIKAEPPTTIIQSAPQPAVTPGAVSAPRIPSTVAGGPGGIRALTPQMLAP
RLPQTSPGQPSIGLHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRAAAPT
SVPPGQAPGNTIISRQVAPSTIIRQGCPAPTSLTATTTLHRPPILQGSVGAAVPGITPRT
VSQTAGTTVASVTVSKETMENVKKCKNFLSTLIKLASTGKQSTETAASVRELVKDLLEGR
LEAEEFTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLSQTSSGPVPST
SPIPTTVVLGSPAPRLTAPVCRPQLQPGISKPGQTPSLVIQPQQQRAMLRPQVALPTTPM
VTLRNQAPGRIMLGQQQVQLKELQPVPVRPEVPVVSKQVSAAALTLAQKNKLKEAGGTFK
DDDDINDVASMAGVNLSEESANILATNSGLVGAVTHSCKDEAFLSCAVLQRRMQEIGRRH
GVTDLGAEVVNFVSHATQQRLQNLLEKVSQVAQQRNTNFKHEDDNYEQSSDVRAQLKFFE
QLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQREANLTA
LAAIGPRKKRKILDSPSSSAAAEGSGTGSSLSGGAGSSGSRPTRQRITRVNLRDLLFCLE
NERSTSHSHFLYKGFLK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcgacggccagcacggactcaaccacgggacacgaccctggcaaaacactt
gctggtagtgatggtgcaacttctgtccccaatcaccaggggaaagtaggctcatactcg
gtgcagactttcaatgggagccaaactatgaactctcacaattcaggaagcgctgcccct
ctcgggggggcggcagtgacaagtggcactggtaacagcagcagcactgcgataactgtc
acagctgtcaacagtggaccagtgatgtctaaagggctggcgagtgcaataatgcacccc
tcgtctaacagtgtaattcagacgcctctcatgaactcacagagtgttgtcgcttcagct
ccgtcagtgagccaggcagcaggacccactgtgacactcgtcaggccgcctatgcaaacc
gcggggtcgggtgcaactttgaatgggaacaataatgtgagccatgcagtggttgccaat
acaacaggtcacacaggtatcggcatacaaaccccgcttgtaaacaacagccagccgtcc
aactcggtgtctgtcagcgcagggtcgcacataatcaaggcagagccacccacaacaata
atacagtcagcaccgcagccggctgtcactcctggcgccgtcagcgctccccggattccg
tcgacggtagctggcggtccaggcgggatccgagccctgacgcctcagatgctggcccca
aggctcccacagacctctccaggacagcccagtataggcctacataacatccagcttccc
cccgggatggtgcttgtgcgcagtgagagtggacagctgttgatgattcctcagcaagct
ctggcccagatgcaggcccaggcacagggaggcatggcgcctcgggctgctgcgccaaca
agcgtgcctcctggccaggctcctggaaacaccatcatcagcagacaagtggcgcccagc
accatcatccgtcaaggctgtccagctccaacgtcactcacggcaaccaccactcttcac
agacctcccatccttcagggctcagttggggctgcagtaccaggaattacccccaggact
gtcagccaaacagctgggaccacagttgcctcagtaacagtgagcaaagagacgatggag
aatgtgaagaaatgtaagaacttcctgtctacattgatcaagctggcatccactgggaag
caatcaacagagactgcagccagtgtgagagagctggtcaaggacctgctggagggcaga
ctggaagctgaggaattcaccagcagattgtacaaagagctcaactcttcaccccaacct
taccttgtgcctttcctcaagagaagcctcccagccttgaggcagctcactccagactca
gcagccttcatccagcagagtcagctctcccagacatcctcaggtccagtcccctccacc
tcacccatccccaccacagtggtcctgggcagcccagcgccccgcctcactgccccagtc
tgcaggccccagctccagccaggcattagcaaaccaggacagaccccctcactggttatc
cagcctcagcagcagagagcgatgctgagacctcaggtagccttaccgacgacccccatg
gtgactctcaggaatcaggcccctggtcgcatcatgctgggacagcagcaggtccagctg
aaagagctgcaaccagttcctgtgaggccggaggtgccagtggtttctaaacaagtctct
gctgcagccctgactctggctcagaagaacaagctgaaagaggctggtggtactttcaaa
gatgatgacgacatcaacgatgtggcctccatggctggagtgaacctatcagaggaaagc
gctaatatcctagcaaccaactctggactagtgggagcggtgacacattcctgcaaggac
gaggcttttctctcctgtgctgttctacagaggagaatgcaggagataggtaggaggcac
ggtgtgacagacctgggtgcggaggtggtgaactttgtctcccacgctactcagcagcgg
ctccagaacctgctggagaaggtttcccaagtggcccagcagagaaacaccaatttcaag
cacgaggatgacaattatgagcagagcagtgatgttcgtgctcagctcaagttctttgag
cagctggaccagctagagaaacaacggaaggaggaacaggagagagagatcctcctaaag
gcagctaagtctcgagcccggcaagaggacccagagcagttgcgtctgaaacagaaggca
aaagagatgcagcagcaggagctggctcagatgagacagagggaggccaacctgacggct
ctggcagccatcggccccaggaagaagaggaagattctggactctccatcctcctctgct
gcagctgagggatcaggaacaggttcctctctgtctggtggggctggctcatcaggatcc
agaccgacacggcagcgcatcacacgcgtcaatctcagggacctgctcttctgtttggag
aacgagagatctaccagtcactcccatttcctctacaagggctttctcaaatag
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