Epinephelus lanceolatus (giant grouper): 117257161
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Entry
117257161 CDS
T07331
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117257161 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117257161 (smarcc2)
03036 Chromosome and associated proteins [BR:
ely03036
]
117257161 (smarcc2)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117257161 (smarcc2)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117257161 (smarcc2)
PBAF complex
117257161 (smarcc2)
GBAF(ncBAF) complex
117257161 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
117257161
NCBI-ProteinID:
XP_033483000
LinkDB
All DBs
Position
7:complement(29539779..29554517)
Genome browser
AA seq
1053 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNPPKTN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTAQTPATQQMMSFPDKVKEKPADLQNFGLRTDMYSKKTGSTKSKSTASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDHSSSLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPDESSDESKSDSQSGEEKREAKDSKDGATEEEEK
QTENGKKEEERGRDQEGERDADKTESEMGDGEKEKDGKEGTEEGQREAESEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHANQAA
SAPPPQGPTASQQAPSTPAPQPAPSPAPPASASAPAPESQPSQGAHTSPPCPPGATPAAH
SSSSSSTTPVLHEPNAPLPGDTLHPSAPVPPPQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccaa
gccgaaccccccaccaacaagtctttgtccagcctggtggtccagctgctccagttccag
gaggaggtattcggtcgacatgtcagcaaccctccgctcaccaagctgccgatgaagtgt
ttcctggacttcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaac
gtggagatgttcatgacgatcgagaagtccttagtgcagaacaactgcctgagcagaccg
gtgatctacctgagctctgacatagagccaaaactgctggggaaactgaaagacatcatc
aaaaggcatcagggctcagtaactgaggacaaggcctccagctcccatgttgtcgttcct
attcccaccagcttagaggaagaggagtgggtgcgtcccgtgatgaagagagataagcaa
gtgctgctccactggggatattttcctgacagttatgacacctggatcccagccagtgag
atcgaggctgctgtggaggatcctcccagcccagaaaagccccgaaaggttcatgccaag
tggattttagacctggaccaatataatgagtggatgaatgaggaggactatgaagtggga
gagggctgccctaaaaggaagaggatctcagccaagaccctgacagatgaggtgaccacg
cctgacgagcggagggacaagaagcctggcagtgccaagaagaggaagaggtcgccgtcg
ccctccccgacccctccgcctcaggagagcaagaagaagaataccaaaaaagggccaacg
accccatacaccaagtctaaacggggccaaagggaggaggaacaggaggatcttagtaaa
gacttggatgaagcgtcacctgttccagcatctgaagagggaaacccacctaagacaaat
aacaccaagaaggactctgattcaactccagtcaagggaggaacagatatggatgagcaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctccgagcgtgaag
ggtgaaccggtgaaaagctcggaccttcacgaggacaacgtgaccgagcagactcatcac
attatcattccgagctatgctgcctggttcgactacaacagtgttcatgccatcgagcgc
agagccctgcccgagtttttcaatgggaaaaacaaatccaaaacaccagagatttatctg
gcgtacaggaacttcatgatcgacacctaccggctcaaccctcaggagtatctgacgtcc
accgcctgtcgcaggaacctggcaggagatgtgtgtgcaatcatgagagtccacgccttc
ctggagcagtggggcctgattaactaccaggtggactctgagagcagacccacacccatg
ggtcccccgccgacctctcacttccacgtcctagcagacactccctccagtctggtgccc
ctgcagcccaagacggcccagacccctgccacccagcagatgatgtccttcccagataaa
gtgaaggagaaaccagcagatctgcaaaactttgggctgcggactgacatgtacagcaag
aagactggctctacaaagagcaagagtacagcgagctctatgagggagtggacagaacaa
gaaacactactactacttgaggggttggagatgtacaaggatgactggaacaaggtttca
gaacatgtgggcagccgtacgcaggacgagtgcatcctgcacttcctgcggctgcccatt
gaagacccttacttggaggaccactcttcatctttgggaccactggcctaccagccggta
cctttcagccaggcaggaaaccccgtcatgagcacagtggccttcctcgcctctgtcgtc
gacccacgagtggcctcagctgcggccaaatctgctctggaggagttttctcgtatgaag
gaggaggttcctgcagcgcttgtcgaggctcatgtacggcgggtggaggaggcagcaagg
gtcagtggccgacaggacccgctgtatggcctggagggtagtggcatcgcaggcactggc
ctggaggagggagagagacctgatgaaagcagtgatgaaagcaagagtgacagccaatca
ggcgaagagaagagggaagccaaggacagcaaagatggagcgactgaggaagaggagaag
cagacagagaatgggaagaaggaagaagaaagaggaagagaccaagaaggagagagagat
gcagacaaaacagagtccgagatgggcgacggggagaaggagaaggatggaaaagaggga
acagaggaaggacaaagagaagcagagagtgaaggagagaggaaagcgaaggtggagcgg
gatgtgggagagggaaatctggccactgctgctgcgtctgcgctcgctgctgctgctgtt
aaagccaagcacctggctgcagtggaagagaggaagatcaaatcccttgttgctctgctg
gtggagacccaaatgaagaagctggagattaaactgcgacactttgaagaactggaaacc
atcatggacagagagagggaggctttggagtaccagcgtcagcagctgctggctgaccgt
cagtccttccacatggagcagttgaaatacgccgagatgagggcccgccagcagcacttc
cagcagatccagcaccagcagcacagccaggctgggggccctcatgccaaccaggccgcc
tcagccccgccgccccagggcccgactgcaagtcaacaagctcccagcacaccagcgcca
cagccggcccccagtcccgcgcccccagcctcagcttctgccccagcccctgagtcccaa
ccttctcagggcgctcacacctcgccgccctgccctccaggcgccaccccagcagcccac
tccagctccagctccagcactactcctgtactccacgagcccaacgcccctcttcccggg
gacacactccacccctcagctccagtcccacctccacagtga
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