Epinephelus lanceolatus (giant grouper): 117257255
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Entry
117257255 CDS
T07331
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117257255 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117257255 (cstf3)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117257255 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
TPR_16
Motif
Other DBs
NCBI-GeneID:
117257255
NCBI-ProteinID:
XP_033483183
LinkDB
All DBs
Position
1:complement(29081426..29093666)
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AA seq
716 aa
AA seq
DB search
MSAEGTADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFSAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLASLLPETVVTPSAPTLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVEELMETFRRCTLPETVDAAVELIT
GKQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagggaacagccgaccaggcggcggcagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcgca
cagttcccaagttctggcagattctggaaactattcattgaagctgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttgcacatcgac
ctgtggaaatgttacctctcatatgttcgagagaccaaagggaagctgcccagttacaaa
gagaagatggcccaggcgtatgacttcgccctggataaaattggcatggaaatcatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagttgaggctgtgggctcgtac
gcagagaaccaacggatcactgcggtacggagggtgtaccagaggggctgtgtgaacccc
atgatcaacatcgagcagctctggagagattacagcaaatatgaggagggaatcaatgtg
cacttggccaaaaagatgattgaggaccgaagtagagactacatgaatgccaggagggtg
gcaaaggagtatgagactgtgatgaaggggttggacaggaatgcaccctcagtgccgccc
cagaactcccctcaggaagcacagcaagtggagatgtggaagaagtacatccagtgggag
aaaagcaacccactgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgca
tatgagcagtgcctgctggtgctcggccaccatcctgacatatggtatgaggcagcacag
tacctggagcagtccagcaagctgctagcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagctaacatctacgaacgtgccatcgggactctcctgaagaagaac
atgctgctctacttttccttcgccgactatgaagaaagtcgcatgaagtacgagaaggtc
cacagcatctataacaagctgctggccatcgaggacattgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagagggcatcaagtcaggtcgcaccatcttcaaa
aaggccagggaagatgctcgcacgcgtcaccatgtgtacgtgacagcagcactgatggag
tactactgcagcaaggataaatcggtggccttcaagatttttgagcttggtttgaagaag
tacggtgacattccagagtacatactggcgtacattgattacctctcacaccttaatgag
gataacaacaccagagttctgtttgaacgtgtcctcacctcagggagcttgtcaccagaa
aagtcaggcgagatctgggctcggttcctggccttcgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgattcagtgctttcaaggacgagtacgagggcaaa
gaaacagccttgcttgtagatagatacaagttcatggacctgtatccctgctctgctagt
gaactcaaggcccttggatacaaggatgtgtctcgtgccaaactggcatcactgctccca
gagaccgtggtgacgccctctgcgcctacactaaaggatgaagcagaccgcaaacctgag
tacccaaagcctgacaccaatcagatgatccccttccagccacgtcaccttgcccctcca
ggtctacaccctgttcctggtggagttttcccagtccccccagctgctgttgtactaatg
aagctgctccccccgcctacgtgcttcactggtccctttgttcaagtggaagagctcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggtaaacagcccgatgcaggaggggagggcaatggatccatggagaaccatgccgtcgcc
aagtcactcaagaggcctaacgcagactctgacgaggaggatgacaaaggagccgtggct
ccacccatacatgacatctaccgcgcacgccaacagaagaggattcgataa
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integrated database retrieval system
