Epinephelus lanceolatus (giant grouper): 117257458
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Entry
117257458 CDS
T07331
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117257458 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117257458 (stau1)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117257458 (stau1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117257458 (stau1)
mRNA cycle factors
Stress granule specific factors
117257458 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
117257458
NCBI-ProteinID:
XP_033483562
LinkDB
All DBs
Position
7:complement(24882879..24892023)
Genome browser
AA seq
724 aa
AA seq
DB search
MSQLQFQCPASPMPAASAPMQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
STTTAVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKVFKVIFTNYAVAFF
LTQVHANKASCVCQIFSVRLTLGDQHWEAEGTSIKKAQHSAAASALAETTLPKPTVRTPR
NTGKNPDGMTHTMELNALCMKLGKKPMYKPIDPYPAMRPPNFNYNVRAPGPYQRSMQQYY
YPFPPVGPMIYHMELSIGGQQFIGKGRTRQLAKHDAAAKALKVLHKEPILQQLPVMNGEP
EEEENLNKSEISQVFEIALKRNLPVNFEVLKEEGPPHMKSFVVRVTVGEFTGEGEGKSKK
IAKKLAAAAVLGELKRLPHIPSVEKTLPRIKKKTKSIIKLQTSPEYGQGMNPISRLAQIQ
QAKKEKEPEYSMVTERGLPRRREFVMQVTVCGQTAEGMGPSKKVAKRNAAEKMLELLGYK
VPQPQPPKPALKTDEKTPVKKPGDGRKVTFFEPGSVEEVALSSKEEDFRLPYLSHQQLPA
GILPMVPEVAQAVGACQVTQAKDYSRAVPNPGKATITAMIANELLYAGTSMTAETILKNK
NNLNQLPHGPLTRPSEQLSFLAAVQGLQVEYKDFPKNNKNEFVSLINCSSQQPLISHGIG
KDVESCHDMAALNILKLLSELDQQPNERTGNGPVSRCGKQEIEGDLHLKQANSSTLAQTL
DGTV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagtttcagtgtccggctagtcccatgcctgctgcctcagctccaatg
cagctggggcagccacagcctggctacagcatcccctgtgcgtcaggcaccctaccctcg
gagagcgccagccagcccatcaggagctctgcactccctgcgggctcagccactccctac
agtaccaccacagcagtatctaacatggcaaaccctaaagagaagacccccatgtgtttg
gtgaatgagttagcccgtttcaacaagattcagcctgagtataagctgctgtgtgagcaa
ggaccagctcactcaaaggtatttaaagtaatttttacaaactatgctgttgcctttttt
ttgacacaagttcatgctaataaggcctcctgcgtctgtcagattttctccgtaaggctc
acactaggagatcagcactgggaggcagaggggaccagcatcaagaaagcccagcattcc
gctgctgcatccgccctagctgagacgacacttcccaagcccaccgtgaggacgccccgc
aacacaggcaagaacccagatggcatgacacataccatggagttaaatgcactttgtatg
aagcttggtaaaaagcccatgtataaacccatcgacccctacccggcgatgagaccacca
aacttcaattacaatgtccgggctccaggaccttaccagcgctctatgcaacagtactat
tacccatttcctccagtgggaccaatgatataccacatggagctttccatcggaggccag
cagtttattgggaagggacgcacacggcagttggccaaacatgacgctgctgccaaggcc
ctgaaagtgctgcacaaggagccaatattgcagcagctgccagtgatgaacggagagcca
gaggaggaagagaacctcaacaaatcagaaatcagtcaagtgtttgaaattgcacttaaa
cgcaacttacctgtcaactttgaggttttaaaagaagaaggccctccccacatgaagagt
tttgtagtgcgtgttacagtcggggaattcactggagaaggcgaaggaaaaagtaaaaag
attgccaagaagctggcagcagcagcggtgctgggggagttgaagaggctaccccatata
cccagtgtggaaaagacgctgccacgcatcaaaaagaaaaccaaatccatcatcaaactg
cagaccagcccagagtatggccagggaatgaatcccattagccgcctggctcagatccag
caggccaagaaggagaaggagccggagtacagcatggtgacggagagaggtctacctcgt
cgtagggagtttgtcatgcaggtgacagtgtgcggccagactgcagagggaatgggacct
agtaagaaggtggccaagaggaacgcagcagagaaaatgctggagctcttgggatataaa
gtgcctcagcctcagccccctaaaccggcacttaaaactgatgaaaagactccagtgaaa
aaacctggtgatgggcgcaaagtgaccttctttgaacctggctctgtagaggaggtggca
ttgagttccaaggaggaggacttccgcctgccttacttgagccaccagcagctgcctgca
ggtatcctgcccatggtccctgaggtggctcaggcagtcggggcctgccaagtgacccag
gccaaggactacagtcgagctgtacccaacccaggcaaggccacaatcactgccatgatt
gccaacgagctcctttacgcagggacatcaatgactgctgaaactatcctaaagaacaaa
aataatttgaaccagctgccccacggacccctcaccaggccttcggaacagctcagcttt
cttgcggcggtgcagggcctgcaggtggaatacaaagactttcccaaaaacaataagaat
gagtttgtgtcactgattaattgctcctcccagcaaccgctcatcagtcatgggattggg
aaagatgtagagtcctgtcatgatatggctgcattgaatatattgaagttactctcggag
ttggaccagcagccaaatgaaaggacaggaaatggaccagtttctcggtgcggcaagcag
gaaatcgaaggtgacttgcacctcaaacaggctaactcaagcacattggcacagaccctg
gatggcactgtttag
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