KEGG   Epinephelus lanceolatus (giant grouper): 117257465
Entry
117257465         CDS       T07331                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ely03009]
    117257465 (rrp9)
Ribosome biogenesis [BR:ely03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117257465 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_WDR19_1st WDR54 WD40_like VGLL4 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 117257465
NCBI-ProteinID: XP_033483577
LinkDB
Position
7:complement(24639001..24645823)
AA seq 484 aa
MSSPFFVKAKQNPKLAKKGNNTLKRKADGNSGGKSKLRAKKPNSKHNEEISSDSETESPV
VPRKRQSNEEIDYEETPQEKKLRLAKLYLEQLREEEEDKAEKDNFETELIAGRLQEEVLE
QKGKLQRLIAKDLIPPDASEIRVLRGHKLPITCLVISSDDKYIFSAAKDCSIMKWDVESG
KKLHTIPGGRKGTEDRHVGHTAHILCLAISSDGKYLASGDMNKLIMIWEAETCKHLYKFT
GHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSRERCV
TAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPL
STVKQAHGCHGDAGLEQPHWVASVAALQNSDTVASGASGCSHNSQVQLWKCGQNYRGLQP
LFSVPVPGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKDAKNGIYIIPLKRKPPNSEEA
SRTE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcttcgcctttttttgtaaaagcgaaacaaaatcctaaattagccaaaaaggggaat
aatacgctaaaacgaaaggctgatgggaactctggcggaaagagcaaactacgagccaag
aaacccaactccaaacacaacgaagagatttccagcgactctgaaacagagagccctgta
gtgcccaggaagagacagtccaatgaggagattgactatgaggaaacaccacaggagaag
aaacttagattagccaaactttacctcgaacagctaagggaagaagaggaagacaaagca
gaaaaagacaactttgagacggagctgattgctggaagacttcaagaagaagtgcttgaa
cagaaaggaaagcttcagcgacttattgccaaagatctcattccaccagatgcctcagag
atcagggtattaagaggacacaaacttccaattacctgtctagtcatcagctctgatgat
aagtacatcttttctgctgccaaagactgctccatcatgaaatgggatgttgagagtggc
aagaaactgcacacaatacctggtggaaggaaaggtacagaggatcggcatgtcggacac
acagcccatatcctgtgtttggctatatcatcagatggaaaatacttggcctctggagac
atgaacaaactgatcatgatctgggaggcagagacatgtaaacatctgtataaattcaca
ggacacaaaggccctgtgtcgggtctttcattcaggaagggaactcatgatctgtacagc
gcctctcacgatcgctcaataaaggtgtggaatgtggacgagaatgcatatgtggaaact
ctcttcgggcaccaggacgccatcacagggctggatagcctgagccgcgagcgctgcgtg
acagcaggaggaagggaccgctcagtgagggtgtggaagatagctgaggaatctcagctg
gtgtttcacggtcacgaaggctccattgattgtatccagctaataaatgaggagcacatg
ataacaggagctgatgatggctctgtgtctctgtggagtgtcaacaagaagaagcctctc
agcacagtgaagcaggctcacggttgccatggtgacgcggggctggagcagcctcactgg
gtcgcttcagtagcggcgcttcagaactccgataccgtcgcctcaggtgcctctggctgt
tcgcacaactcacaggtgcagctgtggaagtgtggccagaattaccgtgggctgcagccg
ctattcagtgtaccagtgcccgggttcgtcaacagtctgaagttttcgagctccggtcag
ttcttggtggcaggagttggacaggagcacaggttgggccgatggtggagactaaaagac
gccaagaacgggatctatattattcctctcaaaaggaaacctccaaattcagaggaagcc
agcaggactgaatag

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