Epinephelus lanceolatus (giant grouper): 117257541
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Entry
117257541 CDS
T07331
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ely03009
]
117257541 (shq1)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117257541 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
RRN3
Motif
Other DBs
NCBI-GeneID:
117257541
NCBI-ProteinID:
XP_033483699
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All DBs
Position
7:42990495..43040100
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AA seq
623 aa
AA seq
DB search
MRFFSKYLINIGLFYTSVFTMITPAFDLSQDPEYLILSIRVPYTRTSEFDLYIEGTDFKF
YAKPYFLRLSLPGRVVEDGREKAKFDIDKGLVTVWVPKETAGEHFEGLQMLTSLLAPKGS
RSAKPLIEDLSTGCSEGAVDDEDEEEFDWQVEQEVYKESSEEELSALQKYGFGNQRSGVF
ARLQEELSDVIDVKNPEGTTAAERRQARLDAEASAFSPDHYLADLFEDDEIKGLLKFRLW
WAKLTPSTEQEGEAAVSFTDDEKEQLRKFTNRSYLLDKTSRYQVWLSLVDILLAYAYEVR
STEGEHNVESPWTIRKLSGTLCWLETYSSLQDVLVSFGRRVLCYPLYRHFGMVSAAIHDT
TKILQSGKACVLKCLLDIHKVFRENDPAYILNDLYITDYCIWIQRVKSKKMSALAETLQK
ASLRKKDLKLELEELEEAASMVAEEEEEQGASKHAPISHSDSSSDSSDSSSSDSADESEA
EGQGSTESNEGGGGGGGGGGGGELSKDNPLQPQPTSAASPIPQEPTSTLLSAVRKVDALP
AASEGSRQLIQELGERVAEELRISEGSSYKAERQCSQANSTAAKTEATSARSSSGTLLEL
SPRRNPLLIVQTQEDDKESDYIC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagattcttcagcaaatatcttataaacattggtctgttttatacatcagtattcaca
atgataactcctgcgtttgacctgagccaagatccagagtacctgatcctcagcatccgt
gtgccctacaccagaacatcagagtttgatctctacatcgaaggaacagattttaagttc
tatgccaagccttactttctcagattatctcttcctggaagagtagtggaggatgggaga
gaaaaggctaaatttgacattgataaaggtcttgtcactgtttgggtccccaaggaaaca
gctggagagcactttgaaggacttcagatgctgacaagtctcctcgccccaaaaggctcc
cgttcagcaaaaccactgatagaggacttaagcacaggatgcagtgaaggggcggtagat
gatgaagatgaagaagaatttgactggcaggtggagcaggaggtgtacaaggagagctct
gaggaggagctgagcgccctgcagaaatatggctttggcaaccagaggtcaggagtgttt
gcaaggttacaggaggaactgagcgatgtgattgatgtcaagaacccagagggaacgaca
gcagcagagaggaggcaggcacggctggacgcagaggcatctgctttttctcctgaccat
tacctggccgatctgtttgaagatgatgagatcaaggggctgttgaagtttaggctgtgg
tgggcgaagctgactccctctacagagcaggagggagaagctgctgtatcgttcaccgat
gacgagaaggagcagctgagaaaattcaccaaccgctcctacctgctggacaagacgtct
cgttaccaagtgtggctcagtctcgtggacatcctgctggcttatgcctatgaagtgcgc
tctacagagggagagcacaacgtagagtctccatggactatcagaaaactcagtggaact
ctctgctggctggagacatacagctccttgcaagatgtcctggtgtcatttggacggagg
gttttgtgctacccactttacagacactttggtatggtctctgcggccattcatgacacg
actaagattctgcagtcagggaaagcctgtgtcctcaaatgcctgctggatattcacaaa
gtgttccgagagaacgacccggcctacatactgaacgatctgtacatcacagactactgc
atctggatccagagggtcaagtccaaaaagatgtcagctttggccgagacgttacaaaaa
gcctccctgcggaaaaaagacttgaagctggaactcgaggagctagaggaggcagcatca
atggtggcggaggaggaagaagagcagggagcttccaagcacgctccgatatcccacagt
gacagcagcagtgactccagtgacagcagcagcagtgactcggccgatgagagtgaggct
gaagggcaaggctccactgaatccaacgagggaggaggaggaggaggaggaggaggagga
ggaggggaactgtctaaggacaaccctctacagccccaacccacctcggctgcctctccc
atcccccaggaacccacaagcacactcctctcagcagtgaggaaggtggacgccctcccc
gcagcctcagaaggctccaggcagctgatccaggagctgggggaacgggtggcggaggag
ctgagaatatctgaaggctccagctacaaagcagagaggcagtgttcacaggcgaacagc
actgcagcgaaaacagaagcaacatctgcgaggagcagcagtgggactttattagagctg
agtcctcgcagaaaccctctgctcatcgtccaaacacaggaggatgataaagagagcgac
tacatctgctga
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