Epinephelus lanceolatus (giant grouper): 117257697
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Entry
117257697 CDS
T07331
Symbol
zgc:158828
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117257697 (zgc:158828)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117257697 (zgc:158828)
Spliceosome [BR:
ely03041
]
Complex C
Other components
Complex C specific factors
117257697 (zgc:158828)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_7
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
117257697
NCBI-ProteinID:
XP_033483865
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All DBs
Position
8:complement(21351268..21363856)
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AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWATEGKVIGVTQPRRVAAISVANRVAE
ERGALVGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNETSDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARTLS
RYGMKKHLRILPMYSGLPYAEQMKVFERVPTSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFNFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFAVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVYGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctctccacgatgaaattctggaagccggggtctgaggctccggggatc
tcagaggagcgggagctcaacacagaaaccaccggctcccccatcatcttcaacccgcac
acagccctctccatagagaaacagcgacagaaactccccgttttcaagcacagaaacaac
atcttatacttggtggagagcttccagactgtcatcatagttggtgagacgggatgtggg
aagacaacgcagatacctcagtaccttctggaggctggctgggcaacggaggggaaggtg
attggagtgacacagcctcggcgcgtggctgctatctctgtagctaaccgtgtagcagag
gagcggggggccctggtgggacacgaggtgggctacaccatccgatttgatgactgctct
gatccccacgccacaaggatcaagttccttacagatggcatgctggtgcgggagatgatg
gctgatcctcttttgaaaaaatacagtgtgttgatgctagatgaagcacatgagagaacc
ctgtacacagacatagccattggcctgctaaagaagattcagaagaagcggcgagacctg
aggctgattgtggcctctgccactctggatgccaagaaattccatgacttcttcaacctg
aacgagaccagtgatcccaacaaggacacctgtggaattctgacagtggagggacgcacc
tttccagtggacgtcttctacactgtcagtcctgtcccagactacgtgaaggccacagtg
gagacagtgctgaagatccatgagaccgaggatgacggagatgtcctggcttttctcacc
gggcaggaagaggtggagaaggtggtgtctcttctgcaggatcaagccaggactctgtcg
cgatacggcatgaagaaacacctgagaattttgcccatgtactccggtcttccttacgcc
gagcagatgaaggtttttgagagggtgcccacctctgttcgcaaagttgtggtggccact
aacatagctgagacctccatcactataaatggagttgtattcgtcattgactgtgcattt
gtgaagctgcgggcgtataaccctcgcactgccattgaatcgctggtggttactcccatc
tccaaggcgtcagccagccagagggctgggagagctggacgaaaccgacctggaaaatgc
tttagactttacacagaggaggactttgagaaactgcctgcctccactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcattaggcattgacaacgtg
ctgcggttcaacttcctgtctcctcctccagctcagaccatggttcaggccctggagctg
ctctacgctctgggaggtctggaccattacggacgtttgactgatcccatgggtgtgcgg
atggcagagtttcctctcagccccatgtttgccaagatgctcctggagtcaggaaacttt
ggctgctccaaagagattgttaccattgcggcaatgatgcagattcagaacatattcgcc
gtgccgcccaatcagaagaaagctgccgcccgagagcacaggaaattcgcagttgctgag
ggagaccacctcaccatgctgaatgtgtatgaggcattcattaagcaccagaagagctct
cagtggtgtcaggaacacttcctcaactacaagggtctgctgcgggctgtgactgtacga
gagcagctccggcgtctcatgaacaagtttaaggtgccgcgcacttcgagtgaaggtgac
cctgatgtgatcttgaagtgcattgtatatgggtttttcgcgaatgcagcccgcattcac
cattctggttcttaccggactttacgagacgatcgtgagcttcacattcaccccaactct
gtgctgtttggagagaaacctcctaaatgggttgttttcaatgaagtggttcagacatca
aaatactacatgcgcgatgtgactgctgttgagtcgtcctggttggtcgagttggcccct
cacttttacaagcaggccaagcatggttcacttgccagcaagaggtcccgggtcctttaa
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