Epinephelus lanceolatus (giant grouper): 117257754
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Entry
117257754 CDS
T07331
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117257754 (ddx20)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117257754 (ddx20)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117257754 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CENP-B_dimeris
CMS1
AAA_19
NOA36
Motif
Other DBs
NCBI-GeneID:
117257754
NCBI-ProteinID:
XP_033483939
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All DBs
Position
8:21861783..21873754
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AA seq
796 aa
AA seq
DB search
MAASVRKAAHDIETRKRTDDVLLSEGIDFSSLLLSQAVLDGLSSSGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKTHLKKCHVAVGSPGRIKQLIELGMLSTTSIRLFVLDEADK
LLEEGSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMREPTFVRLNPSDMGLKG
LKQYYKLVQSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCGLNLSTLPSTIEPGLMDEPCDWDVCT
EALTPGPLPQLTSRTDKKKRAKSVTDQAVERTGQRQSEKTRPAPGLGVNGEQIPKEISPA
KDSLSQCPPRAVPTRKELQDALPKIPPLSSFKKCRSRFMTFEEAERDFHSFITSGLGRSV
EVIRQFRGGEDGGPSDQNGTGESFILNDDGAQNLKRNRWTSSHPRSASSSSGSQSEAEDK
TDQTRGNKYRAITKPQTEARETSTVSKPQAESTRSKACAPSAPKMHHQAARASSGKAPSR
PENSESIPVVKSSGHPSQTASAQTGRNESRKMKGKTGKRSKEISEKINREHKREHDVEEE
EEEEEEEEEEEEEEEEEEEEWSADTYWRASYRAWNDYYASMSPFQEQGYQSYYSIAHSWM
AAYRMNAVYVEELLKH
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccgtgaggaaagcagcccacgacatagaaacgcgaaaacggaccgacgat
gtgcttctgtcggagggaatcgacttcagctccctgctgctgtctcaggccgtgctggac
ggactctcctcctcgggcttccagaaaccgtccccgatccagctcaaggcgatcccgctg
ggccgctgcggactcgatttgattgtacaggccaagtctggcacggggaagacgtgcgtg
ttctgcaccatcgccctggactctctggtcctggagaacccggcaactcaggttctcgtc
ctggctccaacacgtgagatagcggtgcagatccactcagtggtgatggccataggctgt
gccatggagggcctcgagtgccatgtcttcatcgggggccggccggtgagtcaggacaaa
acccatctgaagaagtgccacgtagccgtgggctcacccggtcgtatcaagcagcttatc
gagctgggcatgttatccaccactagcatcaggctgtttgttttggatgaggccgacaag
ctgctggaggagggcagcttccaggaacagatcaactggatcttttcctctctgcctgtg
aacaaacagatgctcgcgctctctgctacctacccagaatcccttgctcagcaccttacc
cgttacatgagagagcccacttttgtcagactcaatcccagtgacatgggcctcaaaggt
ctgaaacagtattacaagctggtgcagtcccatccgttacctcacaaggttttcgaggag
aaggtgcagcacttgctggagcttttcagtaaaatcccattcaaccaggccctggtgttc
tccaatctacacacgagagctcaacacctggcagacatcctgtcctccaaaggcttacct
gctgtttgtatctcaggtggtctgagtcaggaccagagactggaggccatgtcaaaactg
aagcagtaccagtgcagggtgctcatctctactgatctgacttccagaggtatagatgca
gacaaagtaaacttggtgataaacctagatgtgccacaggactgggagacgtatatgcat
cgaattggacgggctggccgctttggcactcaggggctggctgtgacctactgttgccat
ggcgaggaggagaacaagatgatggccattgctcaaaagtgcggcctgaatttgtctact
ttgccatccaccatagagcctgggttgatggacgaaccctgtgactgggatgtctgcacc
gaggctctcactccaggccccttaccccagctgacctccaggacagacaagaagaagcgt
gccaagtccgtcacagatcaagctgtggagcgcactggtcaaaggcagtcagagaagacc
cgtcctgcacctggactgggagtaaacggtgaacagattcccaaagaaatatctcctgca
aaggactctctctcacagtgtcctcctcgggcagtgcccactcgaaaagagctgcaggac
gctttgccaaagatccctcctctcagctcattcaagaagtgcaggtcaaggtttatgacc
tttgaggaagctgagcgggacttccacagttttatcacttcaggcttgggaaggtcagtg
gaggtcatcaggcagttcagaggtggagaggacggtggccccagtgatcagaatggaaca
ggagagtctttcatacttaatgatgatggagctcagaatttaaaacgaaaccggtggaca
tcttcacacccaaggtcagcgtccagttcttcaggctcacaatcggaagcggaggacaag
acagatcagactagaggaaataaatacagagcaatcactaagcctcagactgaagctaga
gaaacatcaaccgtgtccaaaccacaggcggagagcacgagatccaaagcttgtgctcct
tccgcacccaaaatgcatcaccaggcagcccgcgcatcaagtgggaaagctccgtctcgg
ccggagaactctgaatccataccagtcgttaaatcgagtgggcatcccagtcagacggct
tcagcacagactggcagaaatgaatctagaaagatgaaaggaaagactgggaaacggagc
aaagagatttccgagaagataaacagagagcacaagagagaacacgatgttgaggaagaa
gaagaagaagaggaggaggaggaggaggaggaggaggaagaggaggaagaggaggaagag
tggagtgccgacacttactggagagccagctacagagcctggaacgattactacgcttcc
atgtctccttttcaagagcaaggttaccagagctactacagtatagcccacagctggatg
gcagcttatcgtatgaatgctgtctacgtggaagaactccttaaacactga
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