Epinephelus lanceolatus (giant grouper): 117257916
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Entry
117257916 CDS
T07331
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117257916 (zgc:193690)
03015 mRNA surveillance pathway
117257916 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117257916 (zgc:193690)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117257916 (zgc:193690)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117257916 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117257916
NCBI-ProteinID:
XP_033484221
LinkDB
All DBs
Position
8:complement(8682865..8691611)
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AA seq
487 aa
AA seq
DB search
MSDDSWALAVDVQEATTPSKQLDFPKKVEPLRGPRNVRGDINGNIVPDKSENGEWRRDGD
KVDLAEQSLLNKLIRRTLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPANKWTQCLCISPTY
ELALQIGQVIEQMGKFCPDVKLAYGIRGNRMERGVKLQEQIVIGTPGTILDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLPKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVVCKEKEDKFTALCNLYGSLTIAQAMIFCHTRRMAAWLSAS
LTSEGHQVALLSGEMTVEQRAAVIERFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDIINQIEMHFNRRITKLDTSNLE
EMESLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgactcgtgggcgctcgctgtcgacgttcaagaagccacaactccatccaaa
cagttggacttcccaaagaaagtggagccactgcggggtcctcgtaacgtaagaggagac
atcaatggcaacatcgtgccggacaagagtgaaaatggagagtggaggagagacggggac
aaagtggacctggccgagcagtcgctgctgaataagctgatccgtcgcactctggtgcgg
aacagaaaccaggtggaggtcctgcagcgggaccccacctctcctctgtactccgtcaag
acttttgaggagctgaggctgaaacctgagctgctgaagggtgtgtacaacatgggtttc
aacagaccctccaggatccaggagaatgctttgcccatgatgttggcacagccacctcag
aatctgatcgcccagtcgcagtctggcacaggtaaaactgctgctttttctctggccatg
ctcagccatgtaaacccagccaataagtggactcagtgcctttgcatctcgccaacatac
gagctcgctctgcagattggtcaagtgatcgagcagatggggaaattttgtcctgatgtg
aaactggcttacggcattcggggcaacagaatggagcgaggcgttaagctgcaggagcag
attgtcattggaacaccaggcacaatcctcgactggtgcaccaagtacaagcttattgat
cccaagaagattactatgtttgtgctcgatgaggctgatgtgatgattgccacacagggt
caccgggaccagagcatccgcatccacagacagctgccaaaggactgccagatgctcctt
ttctctgcaaccttcgaggactctgtgtggaggtttgcagagcaggtggttcctgatccc
aatatcatcaggctgaagcgtgaagaggagacgctggacaccatcaagcagttctatgtg
gtgtgtaaggagaaggaggacaagttcacagctctgtgtaatctgtatgggagcctcacc
atcgcacaggccatgatcttctgccatactcgcaggatggctgcttggctgagtgcaagc
ctgaccagcgagggacaccaggtggccttactgagtggggaaatgactgtggagcagaga
gccgccgtcatcgaacgcttcaggaacggcaaggagaaggtgctcgtgaccacaaatgtg
tgctctagaggtattgatgttgaacaagtgtcacttgtggtcaacttcgacctccccgtg
gacatggacgggaacgccgacaatgagacgtaccttcaccggattggccgcacaggacgc
ttcggcagaagaggatttgctgtcaatatggttgacagcaaacacagcatggatattatc
aaccagattgagatgcactttaacaggagaatcacgaaacttgacaccagcaatcttgaa
gaaatggagagcctgatcagctga
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