Epinephelus lanceolatus (giant grouper): 117257963
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Entry
117257963 CDS
T07331
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117257963 (clstn1)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Cadherin related
117257963 (clstn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Toxin_R_bind_N
PRIMA1
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
117257963
NCBI-ProteinID:
XP_033484275
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All DBs
Position
8:28703803..28755092
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AA seq
981 aa
AA seq
DB search
MRFRGNTQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCRPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANV
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVTTSLKEPFTISVWMRHGPGAHDKETILCNSDKTDMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTVSLFVDGTTFEPFL
VTEDYPLHSSKIETQLTIGACWQDNSGHDNDTESVSEPTSGGNARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADAESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHEGLEVDMSQLQQHGLEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaatacacaatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaagccatggatcgagacgacgtaccat
gggatcgtaacagaaaacgatgacaaagtacttctggatcctcctctaattgccctggac
aaagatgctcctctacgctacgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccatgggcagaatgtccccttcgaggcagtggtcctggacaag
tccactggtgagggggtcatcagggccaaagacaagctggactgcgagctgcagaaggag
cacaccttcaccatccaagcctatgactgtggagagggtcctgatggtgccaacatgaag
aaatcccacaaagccaccgtccacatccaggtgaacgacatcaatgaatattcaccagtg
ttcaaggagaagtcctacaaagccaccgttatcgaggggaagaagtacgacagcatcctg
aaggtggaagcagtggacgccgactgctctttccagttcagccaaatctgcaactacgag
attgtcacccccgatgtgcccttcactgtggacaaagatggcttcatcaagaacacagag
aaactgagctacggcaaagagcgcatgtacaagctgactgtgaccgcctacgactgtgga
aagaaccgtgcctccgaggatgttctggtcaagatcagtgtcaagcccacctgcagaccc
agctggcaaggcttcaataaaaggatcgagtatgagcctggcacaggtagcctggccctt
ttccctagcatgcacttggagacctgtgatgagccaatcacgtccattcgagccaacgtt
gaactggaaaccaaccacattggaaagggttgcgaccgtgacacctactctgagaagtcc
ctgcacaagctgtgtggagccagctcaggcactgtggagcttctgcctgcacccagcagc
tccgccaactggacagtagggctgcccaccgataacgggcacgacagtgaccaggtgttt
gagttcaatggcacccaggcaatcaaggttcctgatggcatggtgaccaccagcctgaag
gagcccttcaccatctctgtgtggatgagacacggccccggggcccacgacaaggagact
attctctgcaactctgacaagacagacatgaacagacaccactactcgctgtacgtccac
aactgccggctgatcctcctcctccgccaagatccatcagaggcagagaattacaaacca
gcagagtttcactggaaactcgaccaggtgtgtgacaaagagtggcatcactatgtgctg
aatgtggagttccccaccgtgtctctgtttgtggatggaaccacctttgagcccttcctg
gtcacagaggactacccactgcactcctccaagatcgagactcagctcaccattggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggtggaaatgctcgaatggctcagtttttccggggaaatcttgcggggctgatgattcgc
tctggcaagctggagaacaagaaagtgattgactgtttgtatacctgcaaggaaggactg
gacgtccagctgcctgaggaggtagcttcagctgtcaaggttgagtttaaccccaaccag
tcctctctgactgttgagggcgacgacattgatgccttcgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttccccacccctggcatcaggcaccttcgcatctccacc
actgtcaaatgcttcaacgaggagtcctgcgtaaccgtaccagatgccgaaggttatgtg
atggtgctgcagcccgaagagccaaagatcagcctgagcggcatcgaccactttgcccgc
agcgctgccgaatttgagagccaggaaggtgtgacgcttttcccagagctacgcatcgtg
agcaccatcacccgcgaagtggaggccgacgctgagtctgaagcagcagagggagctgat
gacgaccctacggtccaagagacggtggtgtcagaggagatcatgcacaacctggacaca
tgtgaagtgactgtggtgggagacgagctggacggggagcacgagggcctggaggtggac
atgtcccagctgcagcagcatggtctggagatgagctcctctaacctgggccttgtcatc
accggtgtgaacaccatggccaactacgagcaggtcctgcatctaatccgttacaagaac
tggcacactgaggctctctttgacaggaaattcaaactggtctgctccgaactcaacggt
cgctacatcagcaatgacttcaaggtcgaggtaaatgtaatccacacagccaatcctgtg
gagcatgccaacaacgccatggtgcagcccaacttcatcaaccctgtacatcatgcctct
gtagatctgtccggtcacaacctggtcaacgctcaccaggcctcagttgttcccagcgct
gccaccattgtcatcgtggtgtgcgtcagctttttagtgtttatgatcatcctgggcgtg
ttccgcatccgagccgcacaccagcgaaccatgagggaccaggagaacggcaaagagaac
gagatggactgggatgactcagctctcaccatcaccgttaaccccatggagacatacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggatggagaggag
gaagatgacatcacgagcgctgagtcagagagcagcgaagacgaggagggcggagagccg
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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