Epinephelus lanceolatus (giant grouper): 117258157
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Entry
117258157 CDS
T07331
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecule (CAM) interaction
ely04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117258157 (l1cama)
04517 IgSF CAM signaling
117258157 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117258157 (l1cama)
04090 CD molecules [BR:
ely04090
]
117258157 (l1cama)
04091 Lectins [BR:
ely04091
]
117258157 (l1cama)
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
L1 family
117258157 (l1cama)
CD molecules [BR:
ely04090
]
Proteins
117258157 (l1cama)
Lectins [BR:
ely04091
]
I-type lectins (Siglecs)
117258157 (l1cama)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Pur_ac_phosph_N
C2-set_3
Fn3_ROS1
Ig_5
Fn3_VIN3
Ig_C17orf99
Ig_J
Motif
Other DBs
NCBI-GeneID:
117258157
NCBI-ProteinID:
XP_033484616
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Position
8:complement(24540060..24588638)
Genome browser
AA seq
1286 aa
AA seq
DB search
MPHTQRQQVGSRGQCSSCLLPFLLLLLLLSLAAQPSRAAIHIPSNYHISDLKRPPMITTQ
PESVTVFSIEDLVMNCEATGNPPPIFRWTKDGEEFDPGRDPELKVTERSGSFAFYTLSNT
METLKQYQGKYVCYASNELGTAVSNEAILNTDVPPSQQKEKKVNVRSEEGSSIVLKCNPP
QSSMEPIIHWMDWRLHHIVLSERVVVGKDGNLYFAHLTTEDSRDDYTCNVQYLATRTILA
KEPITLTVNPSNSVLRNRRPHMMRPTGSRSTYHALRGQTVELECIVQGLPTPKVTWLRKD
GEMSESRTVKDMFDRRLRFTNISESDGGEYQCTAENSQGKATHTYIVAVEAAPYWIKEPP
SQLYAPGETVRLDCQADGIPSPTISWTINGVPLSAIDKDPRRSLTAGGSLILKDVNFGDT
AIYQCQASNKHGTILTNTNVYVIELPPQILTEDGSTYTFAEGQKASLECETFGSPKPKVI
WESSNTSSLLADPRVNLLTNGVLEIFNVTHEDEGLYTCSVHNTNLSVSAELEVLNRTVIL
SPPQALKVLRGDTAIFTCLALVDPKLGSPFIQWRKNGEKLIDSHSDEKYTSDGPDFKITN
VEEDDEGVYTCQVITRLDMAEASGSLTLWDRPDPPSLLQITDTKHRSVTLSWTPGDDHNS
PVQEYVVEFEDQGLKERGWEVLKRVGGNKEHAVLPLWPYMSYRFRVIAINDVGKSGPSKL
SEIHKTPAEAPDNNPEDVRSESKDPNTLVITWKEMDKRNFNGPDFSYRVLWRRVVGSGPN
WHTNYTTTPSFTVDGVGNFSAFEIKVQAINEKGEGPEPDPVIGYSGEDVPLEAPMDVGVV
LINSTTIRVSWAAVNKEKVRGHLLGYKVYLTRKGSRGHHRGRRSKEPETTVVVETGASEE
KKVISGLRPYSRYDLTVTVFNSKGEGPPSEALSFNTHEGVPGPPMSLMLDSPSETEMTLH
WTPPGQPNGMLIGYLLQYQQIVESDDSPMQVETIDDHTATHLTLKGLDRHSHYRFFLRGR
TAAGDGEPIMREGATMLDGVPPDNISLSAGENAVNLSWVAKKRHRNVSFQIHYIKKNDGS
KWKKTEKVNSSQSFYRLQGLTPGSHYRLRFTYSNTTFWETDIVTEGTEVKEVQQGFATQG
WFIGVVSAIVLLLLTLLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLES
DLEEKRTASQPSLGEESKLCSEDNLDFNGSSAITTELNMDESLVSQFSRPSEGPEVLHGL
PDISPLNPTTVSPATNGMPNSVTILD
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggttggcagtagggggcagtgctcctcttgcctcctc
cccttcctcctcctcctcctcctcctctcccttgctgcccagcccagccgagcagccata
cacataccctccaactaccacataagtgatctcaagaggcctccaatgatcaccacacag
ccggagtctgtcacggtctttagcattgaagacctcgtcatgaactgtgaagccaccggc
aaccctccacccattttccgatggacgaaggatggagaggagtttgacccaggcagggac
ccagagctaaaggtgactgagcgctctggttcattcgcattctacactctcagtaatact
atggagactctgaagcagtaccaaggcaaatatgtctgctacgcatccaacgagctgggg
acagccgtctctaacgaggccatactcaacactgatgttcccccgtcccagcagaaggaa
aaaaaggttaatgtgaggtctgaagagggaagcagtattgttctgaagtgtaaccctccg
cagagctctatggagcctatcattcactggatggactggaggctacaccatatcgtgctg
agtgagcgtgtggtagtggggaaggatggcaacctatactttgcccatttgacaacggag
gacagcagggatgactacacctgcaatgtccagtacctggcgacacgtaccattcttgca
aaggaacccatcactctgactgtaaacccctccaactccgtactgcggaacaggaggccc
cacatgatgagacctactggaagccgcagcacttaccatgccctcaggggccagaccgtg
gagcttgagtgcatcgtccaaggccttccaactcccaaagtcacgtggctgaggaaggac
ggtgagatgtcagaatcacggaccgttaaagacatgttcgaccggcgcctgcgctttact
aatatctcagagagcgatgggggcgagtaccagtgtacagctgagaactcccaagggaaa
gccacacacacttacattgtggctgtagaagcggctccctactggatcaaggagccaccc
agccagttatatgccccaggtgagactgtcagactggactgccaggcagatggcatcccg
tctcctaccatcagctggaccatcaacggggtccctctctcagccatcgacaaggatccc
agacgttctctgacagcaggcggatctctaatcctaaaagatgtcaactttggagacact
gccatctaccagtgccaggcctcaaacaagcatggaaccatcctcaccaacaccaacgtc
tacgtcattgagctgcctccccagatcctcactgaggatgggagtacatacacgtttgca
gagggccagaaggcttccttggagtgtgagacctttggatctcctaaacctaaagtcata
tgggagagcagcaacacttcctcccttttggcggatcccagagtgaacctgctcaccaat
ggggtgcttgagatctttaatgtcacccacgaggacgagggcctctacacctgctctgta
cataacaccaacttgtctgtcagtgccgagctcgaagtgcttaacaggacagtcatcctg
tcacctccacaggctctgaaggtgctgcgtggagacacagcaatcttcacttgtctggct
ctcgttgaccccaaactcggctctccatttattcagtggagaaagaatggtgaaaagctc
attgattcccacagtgatgaaaaatacacatctgatggaccagactttaaaataactaac
gtggaagaagatgatgagggcgtatacacctgtcaggtcatcacaaggcttgacatggct
gaagccagtggcagcctcactttatgggatcgcccagatcctccttccctcctccagatc
actgataccaagcaccgttcagtcaccctcagctggactcctggagacgaccacaacagc
cccgtgcaagagtatgtggttgagtttgaagatcaaggtttgaaggagaggggttgggaa
gtgctgaagagagtaggaggaaacaaggagcatgctgtcctccctctgtggccctacatg
tcctatcgtttccgggtcattgccatcaatgatgtgggaaagagcggccccagcaagctt
tctgaaattcacaaaacacctgctgaagctccagacaataatcctgaagatgttaggagt
gagtccaaagacccaaacaccctggttatcacctggaaggaaatggacaaacgtaacttc
aatggacctgacttcagctaccgggttctgtggaggcgagtggtgggcagcgggcccaac
tggcacaccaactacacaaccacaccgtcattcacggtcgatggcgttggcaacttttct
gcctttgagatcaaagttcaggctatcaatgagaaaggggagggacctgagccagacccc
gtcattggctactctggagaagatgttccactggaggctccaatggatgtgggtgttgtg
ctgataaacagcactaccatcagagtgagctgggcagcagtaaacaaagagaaggtcaga
ggacacctgctgggatacaaggtctacttgaccagaaagggctccaggggccaccaccga
ggccggaggtccaaggagccggagaccactgtggtggtggagactggggccagtgaggag
aagaaggtgatcagtggtctcagaccgtattcccgctacgacctgaccgtcacggtattc
aacagcaagggagagggacccccctctgaggcgctgtccttcaatactcatgagggagtt
cctggtcctcctatgtccctgatgctggacagcccatcagagacagaaatgaccctccac
tggacacctccgggccagcccaatggaatgctcattggatatctgctgcagtaccaacaa
attgtggagagtgatgacagccccatgcaggtagagacgatagacgaccacacagccacc
cacctcaccctgaagggcctggaccgccacagccactatcgcttcttcttgagggggcgc
actgctgcaggcgacggagagcccatcatgagggagggcgccaccatgctggatggagtg
cctcctgacaacatcagcctttctgcgggggaaaacgcagttaacctgagctgggtggcc
aagaagagacacaggaatgttagcttccagatccactacatcaaaaaaaacgatggcagt
aaatggaagaaaacggagaaggtgaactcctctcagtctttctaccgcctccagggcctg
actcctggctctcattatcgtctacgcttcacctacagcaacaccaccttctgggagact
gacatcgtgacagaaggaacagaagtgaaggaggtgcagcaaggctttgcaacgcagggc
tggtttatcggtgttgtgagcgccattgtgctgctgctgctgaccctgctcatcctctgc
ttcatcaagaggagtaaaggaggaaaatactcagtgaaagataaagaagagggtccgatg
gactcagaagcacggcctatgaaggatgagacttttggagagtacagatctctagaaagt
gacctagaggaaaagcgcacggccagccagccgtccctgggcgaggagagcaagctgtgc
agcgaggacaacctggacttcaacggcagcagtgccataaccaccgagctcaacatggac
gagtctctggtcagccagttcagtcggcccagcgagggtccagaggtgctgcacggcctg
ccagacatctctccgctgaaccccaccaccgtctccccagccaccaacggcatgcccaac
tcagtcaccatcctcgattaa
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