Epinephelus lanceolatus (giant grouper): 117258258
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Entry
117258258 CDS
T07331
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04120
Ubiquitin mediated proteolysis
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117258258 (ube4b)
04120 Ubiquitin mediated proteolysis
117258258 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117258258 (ube4b)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117258258 (ube4b)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
U-box type E3
117258258 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117258258
NCBI-ProteinID:
XP_033484864
LinkDB
All DBs
Position
8:28772330..28797615
Genome browser
AA seq
1380 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPIPGPSGAAPQPPAASQ
SLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTA
SCENSMSQVDVDSGIENMEVEDSDRREKRNLTEKEPSANSDVSEEQALQLICKILRVSWK
EQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATSQP
IAAAKSPDHRLTLLQPSSQGGSPMGHSAGSFGASSLSSLYGCSNPHPMAMDAAKRTSPSL
PTPTTPSVPSTPSTPSTPQFIVPPSPPATTTTPRLNPPSAPMPISQRYRPYSVTSPLGAP
SPSSPGQRGLSVFGPSPSPAGPSVPPNTPVPVPPPSPQSLSLRSPRARNQPSTTPPPMVP
PSPRSNARQAAFASRMPPSSPLSFLFFALSDMSQDSSDEESQEEEEDFARVQFGSSLGAC
GGGMSCDSASDRFTIETCKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQ
CISHVALVLQGTLTQPRSPLHQSLLVPYLLCRNLPYGFIQELVRITHQEEEMFRQIFIPI
LHGLALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCSLITSLPLWCPKPLSPGCGR
EIQRLSYVGAFFSLSVFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKV
LHNILLNGETRESALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKL
ETVDPYYIFHPRCRLVVSQEETRLKATMEELKSWLTELHEDPTKFSEPKFPTECFFLTLH
THHLSILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKL
VRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNINLPLNPEIPKSFAALPEF
YIEDVAEFLLFVVQYSPQVLYEPCVHDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNP
AVQPRTQRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSL
WQNLAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQ
LPREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNF
NLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELF
EEVISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTD
PVMLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRPV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagatccgcagaaggcgactggcacgacttgcaggggga
cagacgtcacagcccagcacccctctcagcacacccctgacatccccacaaagagagact
ccccctggacccattcctggaccctcaggtgccgcaccccagccaccagctgcctctcaa
tcattggggctcaatgtccacagtggtacccctgccacatcccctatgggcacctctggg
gtggcatatggtagtcagagcagcgagggtgtgagctccctctccagctccccctcaaac
agccttgagactcagtcccagagtctgtcccgatcgcagagcatggacattgacactgcc
tcctgtgaaaatagcatgtcccaggtggatgtggactcagggatagagaacatggaggtg
gaagacagcgatcgcagggagaagaggaacttgactgaaaaggaaccctctgcaaactca
gatgtctcagaagaacaggctctgcagctcatttgtaagatcctccgcgtatcgtggaag
gagcaggatagagatgtcatctttcttccttcactggctgcagagttccaccagaaccct
aaagatgtatactctgacttcaaagacctgatcggtcagatcctgatggaagtcttaatg
atgtccacccagtcgcgtgtccacaaccccttcgccagcttgaccgccacctctcagcca
attgcagcagccaaatcccctgaccaccgtctgacgctgctgcagccctccagccaaggt
ggcagccccatgggccacagtgctgggtcatttggagccagctctctgtccagtctgtat
gggtgtagtaatcctcacccgatggctatggatgcagccaagaggacctccccatctctc
cccacccccactacaccctctgtaccttcaacaccttccacaccctctaccccacaattc
attgtgccccctagcccacctgctactaccactactccaagactcaaccctccatctgcc
cccatgcccatctcccagcgctatcggccttactctgtcacctctcccttaggggctcct
tccccatctagccctggtcaaagaggacttagtgtctttggaccctctcctagccctgcg
gggccctctgttcctcctaacaccccagttcctgtgccaccacccagccctcagtccctc
tccttgaggtcacctagggctcgcaaccaaccctccaccacaccccctccaatggtgccc
ccttctcccagatcgaatgcccgacaggctgcctttgcttccaggatgccaccgtctagc
cccttgtcgttcctgttctttgccctctctgacatgtctcaggacagcagtgatgaagaa
tctcaggaggaggaggaggattttgcacgggttcagtttgggtccagtcttggtgcatgt
ggaggggggatgtcctgcgattcagccagcgaccgcttcaccattgaaacatgcaaagag
acagagatgctgaactacctcattgagcgttttgacagtgttggcatggaggagaggaaa
gctcccaagatgtgtagccaaccaaatgtcagccagcttctcagcaacattcgctctcag
tgtatttcccacgttgccctggtcctgcaaggcaccctgacccagccgcggagccctctc
catcagtctttgctggtaccttatctgctgtgtcggaaccttccttatggctttattcag
gagctggtgcgcattacccaccaggaggaagagatgttcagacagatcttcattcccatc
ctccatgggctggctcttgctgtgaaagaatgttcctttgacagtgacaactttaaattc
cccctcatggcattagctgagctttgtgaaatcaagttcggaaagactcacccagtgtgc
agtttgataacgtcgctgcctctgtggtgtcccaaacctctgagccctggttgtggcaga
gagatccagagactgtcctatgtgggagccttcttcagcctctctgtgtttgctgaggat
gatacaaaagtaggagacaagtatttctctggcccagccatcaccatggagaacacgcga
gtagtcagccaatcattgcagcactacctggagtcagcaaggggtgacttgttcaaagtt
cttcataacatcctgcttaatggagaaacgcgcgagtcagctcttaattacatggcagct
ttagtcaactacaatgtgaagaaagctcagatgcagaccgatgataagctggtgtcgaca
gacggcttcatgctcaacttcttatgggtgctgcaacagttgagcatgaagatcaagctg
gagacagtcgacccttactacattttccacccacggtgtcgccttgttgtcagccaagag
gagacgcgtctgaaagccaccatggaggagctcaagagctggctgactgagctgcatgaa
gaccccaccaagttctcagaacccaagtttcccaccgagtgtttcttcttgacgctgcac
acccaccatttgtccatcctgcctggctgcaggcgttacatccgcaggttgcgagccatc
cgcgaactgaataggactgtagaggagctgaagaacagtgaaagccagtggaaagattct
cccctggctagtcgacacagggagatgctcaagcgatgcaaaacccagctcaagaaactg
gtgcgtgccaaagcttgtgctgacgtgggccttctggatgagaacctgcttcgcagatgt
ctgcagttctacagcacagtcatccagctcattcttcgcatggtggaccctgcctacccc
aacattaacctgccgctgaaccctgagattcccaaaagctttgctgctctgcctgagttc
tacattgaagatgtggccgagtttctgctttttgtcgtgcagtattctccccaggtttta
tacgagccgtgtgtccatgacattgttaccttcttggtggtgttcatctgcagccagaac
tacatcaggaacccctaccttatcgctaagttggtggaggtgctgttcgtcaccaaccct
gctgtacagcctcgtactcagcgattctctgaaatgatggagaaccacccattgtctgtc
aaacagctggtccctgctctcatgaagttctacactgatgttgagcataccggtgccacc
agcgagttctatgataaattcactatacggtaccatatcagcacgatcttcaagagtctc
tggcagaaccttgcccaccacggtaccttcatggaggagttcaactctggcaagcagttt
gtgcgctacatcaacatgctgattaatgacaccaccttcttgttagacgagagccttgag
tccctgaagcgtatccacgaagttcaagaagagatgaagaataaggagcagtgggagcag
ctgcctagggagcagcagcagagccgccaatcccagctgactcaggatgagcgggtgtct
cgctcctatctagctctggccacggagacggttgaaatgttccacatcctcacaaagcag
gtccagaagcctttcctcaggcctgagctgggaccccgtttggccgccatgctaaacttt
aacctccagcagctctgtgggcctaagtgtcgggacctgaaggtggagaaccccgagaag
tacggctttgagcccaagaaactcttagaccagctgactgacatctacctgcagctagac
tgtgcccgctttgctaaagcgattgcagatgaccagcggtcgtacagccgtgagctcttt
gaagaagtgatctcaaagatgaggaaggctggtataaagtcctctattgccattgaaaaa
ttcaagctgctatcagagaaggtggaggaaatagtcgccaagaactcccaatctgaaatg
gattacagtgatgcacctgacgagtttaaagaccctttgatggacacactgatgactgac
cctgtgatgctgccttcggggaacatcatggaccgatccatcatcctgcgccacctgctc
aactcccccaccgatcccttcaacaggcagccgctcacagagagcatgctggagtcagtc
cctgagctgaaggagaggatccatacctggatgagagagaaacagggcggacgacctgtc
tga
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