Epinephelus lanceolatus (giant grouper): 117258386
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Entry
117258386 CDS
T07331
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117258386 (rbm39b)
Spliceosome [BR:
ely03041
]
Common components
Common spliceosomal components
General mRNP proteins
117258386 (rbm39b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
117258386
NCBI-ProteinID:
XP_033485134
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All DBs
Position
8:19204739..19213133
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AA seq
501 aa
AA seq
DB search
MADDFDVEAMLEAPFRKDEIKSSHANGHEDQNKKKRRSRSRSRSPGSRKRRSKSRDRKKG
KKRSRSRERKRSRSRERHRSKSRSKERSGRYRARKSPVRKRSKSRSPPFKKEKSPIRQPI
DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFV
EASSVPLAIGLTGQRLLGVPIIVQASQVMAEKNRAAAAANNLQKGSSGPMRLYVGSLHFN
ITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRP
MKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ
MTGSIPFGNIAAPPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWAIEIQDD
VIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLP
TYHNLFPDSVTAKQLLMPARR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtagaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaatggacatgaagaccaaaacaagaagaaaaggaggagccgaagc
aggagccgaagtccaggctcccggaagaggagaagcaagagcagagacagaaagaagggt
aagaagaggagcaggagccgagaaagaaaacgaagccgcagcagagaacgccatcgcagc
aagtccagaagcaaagagcgttccgggcggtacagagcacgcaagagcccagtccggaaa
cgttccaaaagtcggagcccccccttcaaaaaagagaagagtcccatcaggcaaccaatt
gacaatctaacaccagaggagagggatgcccgcacagttttctgcatgcagctggctgcg
agaatcagagctcgagacctggaggatttcttctcagctgttggaaaagtaagagacgtg
agaatgatctcggacagaaactccaggagatcaaagggcatcgcatacatagagtttgtg
gaggcttcgtctgttccactggctattggattgactggtcagaggcttttgggagtgccc
attatcgtccaggcctctcaggtgatggcagagaaaaatagagctgcagctgctgccaac
aatctacagaagggcagctcgggtccaatgaggctgtatgtgggctctctgcacttcaac
attactgaagaaatgcttcgagggatctttgagccttttggaaagattgagggaatccag
ctgatgatggacagcgagaccgggcgatccaaaggatacggcttcatatcgtttgcagat
gcagaatgtgcaaaaaaggccctggagcagctgaacggctttgagctggccggacgtcca
atgaaggtggggcatgttacagagcgctcagattcatcgacagccagctcgttcctggac
aacgacgaacttgaaaggactggcatcgacctcggcaccacagggcgtctgcagcttatg
gctcgactagcagaaggaactggactgaagatccctcctgctgcacagcaggctctacag
atgaccgggtccataccatttggaaacatcgctgctccaccagctgttcctactccagct
ccaagccaagccttgaacctcccctcacagccgctggccacacactgccttcagctgtcc
aacctgttcaacccacaagctgaaaacgatcccagctgggccatcgagatccaagacgat
gttattgaggagtgcaacaaacacggagggatcgttcacatttatgttgataagaactct
gcccaaggtaatgtgtatgtgaagtgtccctcaataccagcagcgatggcaactgtaaat
gcacttcatggacgctggtttgcaggcaaaatgataacagctgcctacgtccccctaccg
acctaccacaaccttttccctgattcagtaacggcgaagcagctcctaatgccagctcgt
cgatag
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