Epinephelus lanceolatus (giant grouper): 117258412
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Entry
117258412 CDS
T07331
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117258412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117258412
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Major cadherins
117258412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
DUF5527
Motif
Other DBs
NCBI-GeneID:
117258412
NCBI-ProteinID:
XP_033485205
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All DBs
Position
8:15478839..15817935
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AA seq
934 aa
AA seq
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MRTDFALVLTAALLLDTFWRNNGEHASKGPCQPGFSQSFYSVLISRDVLQGQGICKDTTV
SSQKVKFDDCMGNEAVVFQSSDPIFSVRTDGSIFAQGEGASLDVPVQFKLTASGPHTHVW
ETVVQLALIDPPSPQQDENEVTEEEGKVAERKERKEASQAPPPVIMFSGSSLNSSKGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDKDISIRYSITGVGADQPPNEVFNIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHVSAFDGDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENRV
DLVVANLTVIDADQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSL
TTFSASDPDRLQMQQTIRYSKLNDPADWLSINRTNGQIITTAMLDRESVYVKNNIYEATF
LATDNGSPAASGTGTLQIYLIDINDNPPALIPRESQICERVNKNVHGVNITAADADTDPN
AGPFVFELPNFPTSIRRNWTISRISGDYGRLGLRYQVYLEPGVYEVPIIVSDSGNPPLSN
RSVIKVKVCPCDEHGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKE
RHTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttcgctctggtcctgacagcagccctgcttcttgacacattctggagg
aataatggggagcatgcttcaaaaggtccctgccaacctggcttctcacaaagcttctac
tctgtgctgatttcaagggatgtactgcaaggccagggcatatgtaaagataccacggtg
tcatcacaaaaagtgaagttcgatgactgcatggggaatgaagccgtggttttccagagc
agcgaccctatcttcagcgtgcgaacagatggctccatctttgcccagggtgagggagcc
agcctggatgtaccagtccagtttaaactgacagcaagtggtccacacacacatgtttgg
gagaccgtggtccaactggccctaattgacccaccatcacctcaacaagatgaaaatgag
gtcacggaggaagaggggaaagtcgctgagagaaaagagcggaaggaggcgtcccaagca
ccaccacctgtcatcatgttctcagggtccagcctgaacagctccaagggtctacggcgg
cagaagagggactgggtgatcccaccaatcaacgtggcagaaaattctcgaggaccgttc
cctcagatgctcgtcagtattcgttcagatcaggataaggacatctccatccgatacagc
atcactggggtgggagcagatcagccgcccaatgaggtgttcaatatcgacccggtgctt
ggaaagatgttcgtcaccaaacctcttgatcgagaacatcgctcctcttaccatctgcga
gcccacgccgtggacatgaatgggaaccaggttgagaaccccatcgatctgtacatcttc
gtcatcgacatgaacgacaacagacccgagttcaaaaaccaggtctacaatggctctgtg
gatgaaggctccaaaccaggaacatatgtgatgcatgtgtcagcgttcgacggtgacgac
aacaccacggctaacggaatggtgcgctatcgaatcctgtcccagacgccacacagtccc
atccccaacatgttcaccatcaacagcgagactggagatattgtgaccgtggcacctggc
ctcgatcgagagaaagtgtcccagtataccatcatcgtgcaggccacagacatggagggc
aacctgaactttggcctttccaacacagccactgccatcatcactgtcacggacatcaac
gacaaccctcccatgctgacctcccgaactttttccggtgaggtcccagaaaaccgagtg
gatctcgtggtggccaatctgacggtaatagatgctgaccaaccgcactcgcctaactgg
aatgccatctacaggatcatcagtggagacccttctgggcacttcaccatccgcactgac
cctgtcaccaacgacggcatggtcaccgtggtgaagccagtagactttgagatgaaccgt
gccttcatgctgacagtggtggtgtccaaccaggcccacctagccagcggtatccagtcc
tctctccagtccacagctggagtcaccatatctgtccaggacgtcaacgagcccccttac
ttccccacgaacccaaaacacatccgctttgaggagggcgtccccgctggcaccagcctg
acgaccttctcagcctccgatcccgatcgactacagatgcagcagacaatcaggtattca
aagctgaacgacccagccgactggttgtccatcaacagaaccaatggtcagatcataacc
acggcaatgctcgaccgggaatctgtctacgtcaaaaacaatatatatgaagccacattc
ctggccacagacaatggctctccagcagccagcggcacaggcacgctgcagatctatctg
atagatattaatgacaaccccccagcactcatacccagggagtctcagatctgtgagcgg
gtgaacaagaacgtccacggtgtcaacatcactgccgccgatgctgacacggaccccaac
gccggaccctttgtcttcgagctgcccaactttcccaccagcatccgacgcaactggacg
atttctcggatcagtggtgattacggccgtctaggactgcggtaccaggtgtacttagag
cccggggtgtatgaggtccctataattgtgtcggactcggggaaccctccgttatccaac
aggtcagtcatcaaagtgaaggtgtgtccctgcgacgaacacggagactgcaccaccctc
ggggccgtggcggccgccggcctgggaaccggagccatcatctccatcctcatttgcatc
atcatactgctcagcatggtgctgttgtttgtggtgtggatcaagcggagagagaaggag
aggcacaccaagcagctgctcattgaccccgaagacgatgtcagagacaacatcctcaaa
tacgatgaagagggaggaggagaagaggaccaggactacgacctgagccagctgcagcag
cctgactccttggagcacatcatcagcaagccaccaggtgtccgcagggtggatgagcgt
cccatcatccctgagtcccagtacccaatcagacctgtcgtgccccaccctggagacatc
ggggacttcatccatgagggtctgcgagcagcagacaacgaccccacagctcctccatac
gactccctgctggtgttcgactacgagggcagcggctccaccgccggctccgtcagctcc
ctcaactcctccagtactggggaccaggactatgactacctcaacgactggggtccccgc
ttcaagaagctggccgacatgtatggaggaggggacgatgattaa
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