Epinephelus lanceolatus (giant grouper): 117258452
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Entry
117258452 CDS
T07331
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ely03400
]
117258452 (smc5)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117258452 (smc5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF7946
AAA_25
Motif
Other DBs
NCBI-GeneID:
117258452
NCBI-ProteinID:
XP_033485270
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Position
8:25398819..25412163
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AA seq
1077 aa
AA seq
DB search
MASSGKRRRTSHVTSSSQTVSSGANVFAGSQPNGNGGEGNFVEGSIVRLTMKNFLTYDYS
VVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGCHKGFIEIEL
HKVGGNVVINREIHVENNQSLWMLNGRHCNQKAVEEEVKALRIQVSNLCQFLPQEKVGEF
AKMSKTELLEATEKSVGPPEMYEYHCELKNFRNRERELENVVKEKASFLEKAKQRNERNK
HDVNRYYEKKRHLDVIELLDKKKPWVEYETTRKEQEGVKKERDEAKKQLSALKQSQAPML
RKIHLIDNQMKPTDAQIKAKTAAIKDASQKCKQKQDQLDRKNKEIDDIKQTLRLKQMEEE
DHQKRISNTRRTIDDLKAELAKVGDQPDVTPRINAVNVELRNMREERAKIEGEKSDLRRE
KDNLHAEYKMLERKLRDMNNMMNAKEEKLRGRHKDTHTALQWLRQHKHLFHGNVHEPMML
VINVKDHRYAKYVENHISFHDLRAFVFQRKDDMEKFMTEVRDKMNLKVNSISAPVESCSG
RKPSLNIESLKRFGFFTYLREMFDAPDEVMSYLCHQYKVHDVPVGNDQTKAMIKTVIEEP
YLRVLYTTEERYTLKRSHYSNKISTSNSAVHPSQYLTITVDAEQKRQLEQQMKACEVKLR
DIDERLKALQAEAAALDRRDNELLAEKKHLSEVKGKKRQLEQKISTKQDSLRQMERSVID
LKKIEEETKEKIAAVNAQKVSIVAAFMAQMKLRAKLTMEKVHLALETVGLTAEKAKLEND
CREGASELKTLDQKCGRLEQRKIQLTEQCKGLLKRAKTICRMQPDESLPEDLRNAFSKLP
DTLDEIDAMLNEERSRAECFTGLSESVVEEYNRREQEIKHLEKELEEKTNALNAYRQNIS
EAKERWLNPLKQLVEQINDKFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFHSSTQ
LHELTAHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTAC
KETTSQYFFITPKLLQNLKYAEEMTVLCVHNGGQMLPPNEWDEKAFIKRCLRRKARA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccggcaaaagacgacgaaccagtcatgtcaccagcagctcacagaccgtt
agcagtggggccaacgtgtttgcaggcagccagcccaacggaaacggaggagagggcaat
tttgtggagggatccatagttcggctcaccatgaaaaacttcctgacctatgactactct
gtggtgtatcctggacctaatctgaacatgattgttggagccaatggaactggcaagtcg
agcatcgtgtgtgccatctgtctgggtctggctggcaagactgctatcctgggcagaggt
gataaggttgggctgtatgtcaaacgtgggtgccataagggattcattgagattgaactg
cacaaggttggtggtaatgtagtgattaaccgagagatccatgtggagaacaatcagtcg
ctgtggatgctgaatggaagacactgcaaccagaaagcagtggaagaagaagtcaaggct
ctgcgtatccaagtcagcaacctctgccagtttctgcctcaggaaaaagtgggagagttt
gccaagatgtccaaaactgagttgctggaggcaactgagaagtcagtgggaccaccagag
atgtacgagtatcactgtgagctcaaaaacttccgcaacagagaacgagaactggagaat
gttgtgaaggagaaggccagtttcctggagaaggccaagcagaggaacgagaggaacaaa
catgacgtgaaccgctactacgaaaagaagaggcatctggacgtgattgagttgcttgac
aagaagaaaccatgggtggagtacgagaccacccgtaaggagcaagagggtgtgaagaag
gagcgagatgaggccaagaagcagctctctgccctgaagcagtcccaggctcccatgctg
aggaagatccatctgatcgacaaccagatgaaaccaactgatgcacaaataaaggctaag
actgctgctatcaaagacgcgtctcagaagtgcaaacagaaacaagatcagttggatcga
aaaaacaaagagattgacgatatcaagcaaacgctgaggctgaagcagatggaagaggaa
gaccaccagaagagaatcagcaacaccagacggaccattgatgacttgaaggcagagctc
gccaaagttggcgaccaacccgatgtgacaccgcggatcaatgccgtcaatgtcgagctg
aggaacatgcgggaggagagagccaagatcgaaggagagaaatccgatctgcgcagggag
aaggacaacctccatgctgaatacaaaatgttggagagaaagctcagggacatgaacaac
atgatgaatgccaaagaggagaagctgcgaggacgccacaaggacacacacactgccctc
cagtggctcagacagcacaaacatctctttcatggaaatgtccatgagcccatgatgctg
gtgatcaatgtgaaagatcatcgctatgctaagtacgtggagaaccacatctcattccac
gatctgcgggcatttgtcttccagagaaaagacgacatggagaagttcatgactgaggtc
cgtgacaagatgaacttgaaagtgaactccatttctgctccagtggagtcgtgttctggc
aggaagccatccctaaatattgagtccctgaagcgttttggtttcttcacctacctgcgt
gagatgtttgacgcccctgatgaggtgatgagttacctctgtcaccagtacaaggtgcat
gacgtccctgtgggcaatgaccagactaaagccatgattaaaacggtgattgaggagccc
tacctcagggtgttatacacaacagaggagaggtacacattaaagaggtcccattactcc
aacaagatcagcaccagtaactccgcagttcacccttcccagtacctcaccatcactgtg
gacgccgaacagaaacggcagctggagcagcagatgaaggcctgtgaggtgaagttacga
gacatcgacgagcggctgaaggccctgcaggcagaggccgctgcactggatcgccgtgat
aatgaactgttggcagagaagaagcacctgtctgaagtaaagggcaaaaagaggcaactg
gagcagaaaatcagcaccaaacaggacagtctgaggcagatggagcggagtgttattgac
ctgaagaagattgaagaggagactaaagaaaaaatcgcagctgttaatgcccagaaggtg
tccatagtcgcagcgttcatggcccaaatgaagctgagagccaagctgaccatggagaag
gtgcacctggctttggagacggtggggttgacagctgagaaggccaagctggagaatgat
tgtcgagaaggtgcttctgaactcaagaccctcgatcaaaaatgcggccgtctggagcag
aggaagatccagctgacagaacaatgcaaaggccttctgaagagagcaaaaacgatctgc
aggatgcaacctgatgagtcattacctgaagacctgcgtaatgcattcagcaaactgcct
gacacgctggacgagatcgatgccatgctgaatgaggagcggtccagagctgagtgcttc
actggcctcagtgaaagtgttgtcgaggagtacaacaggagagagcaggagatcaaacat
ctggagaaagagctggaagagaagaccaacgccttgaacgcctaccggcagaacatatct
gaggcgaaggagcgctggctgaacccgctgaagcagctggtggaacagatcaatgacaag
ttcagtgatttcttccgctccatgcagtgtgcaggagaggtcgatctgcactcagagaat
gaggaagagtatgacaaatatgggatccgaattcgagtgaagttccacagcagcactcag
ctccacgagctgactgcccaccatcagagcggaggagagcgcagcgtctccacaatgctc
tacctcatggccctgcaggagctcaatcgctgccccttcagagtggtggatgagatcaac
cagggaatggatcctgtaaatgagagaagagtctttgacattgtggtccgcacagcctgc
aaagagacgacatcccagtacttcttcataactcccaaattgctgcagaatctcaagtac
gctgaggagatgaccgtcctctgcgtccacaacggtggtcaaatgcttcctcccaacgaa
tgggacgagaaggctttcatcaaacggtgtctccgacgaaaagccagggcttga
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