Epinephelus lanceolatus (giant grouper): 117258534
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Entry
117258534 CDS
T07331
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117258534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117258534
04090 CD molecules [BR:
ely04090
]
117258534
04091 Lectins [BR:
ely04091
]
117258534
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
L1 family
117258534
CD molecules [BR:
ely04090
]
Proteins
117258534
Lectins [BR:
ely04091
]
I-type lectins (Siglecs)
117258534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
C2-set_2
Sp38
DUF1425
Motif
Other DBs
NCBI-GeneID:
117258534
NCBI-ProteinID:
XP_033485427
LinkDB
All DBs
Position
8:complement(2430012..2504205)
Genome browser
AA seq
1292 aa
AA seq
DB search
MCVSQHRWTGYRGPCSPALPLILLLLLPLSFLSSMPPFAQGAIHIPKDYKVHKMLQPPLL
TKMPTSYTAFSLEDIYLPCEASGNPTPTFRWMKDGKLFGSEHNESGTLYAEEEEPLELYE
GKYRCFASNTLGTAMTQTIQVIVEAQPVMAKQQKIHLRAFEGESMVLTCRPPQSSDPPLI
HWMDKKMVHIKQSERVMVGQDGNLYFSDLLKSDTRDDYTCNAQYTAARTVLPDTPIRLTV
MPSNDVSQVRVPRLFRPTGTHTTIMALRENSVTLECIPTGLPTPVVKWKKKDGHMHETSG
KLEAHDRWLHFESITQNDDGEYECTASNNVGSVSHAFTLTVEAAPYWVKEPQNLLYSPGE
TVRLECQAEGIPTPAITWSINGQPVTEVDADPRRSIAEGVLILRDVEFADTAVYQCEATN
KHGAILLNTYLYVVELPPQILSSDGVVYRVTEGGDVMLHCESFGSPRPHVTWEGGDKLPL
LSDPRVSLLTNGTIELSGASHDDTGEYTCSIKHSNISISAHLEVFNRTQILTEPQHLRTL
RGTNALLDCDFYKDPQLLQYRIIWSKDGLELQESSPDDKYTIFENGTLKVTNVHPEDNGV
YSCEVKTDLDRVKASGSITVVARPDPPKDLFLSDIEDHSLTLSWIPGHSHNSPIIEFIVE
AREEQHSEEGQWKWEEWKKVSGEFNHLELTLHPYCTYRFRVIAINEIGNSDPSKPSEHRS
TPPAVPDKNPTGVRSESIDPKTLIITWDEMDKRLHNGQGFQYKVYWRQAGGADVRWNTAD
VQSPPFMVNNTGTYTPFEIKVQAVNSLGAGPPPRPEIGHSGEDVPEEAPTGVTTTVINST
VRVKWNEAKNVRGLLLGYKIYIRRMGPHGGRLRRSLGKVHHEKEDRSERGKDRDRGSRVV
VVHGMKTSEEVTGLQLYSQYELSVAAFNSKGGGPHSPPHHFSTPEGAPGPPASLTFDSPS
EKSLILYWTPPVEPNGVLLGYMVQYQEEVESRDSLLQMEIISDPSVTHIILDSLDPSSYY
IFKVIARTAAGDGPPITRRGATLLDGVPPSNISIISSNTSLNLSWVPGERDRNHGFIIRY
MRKSLGAKWEESEVVNSTQGFYSLKGLQPGSQYHLMIKHENDTMWEDVKWTMGPVPSEMP
GGFATQGWLIGLISAIVLLVLILLILCLIKRSKGGKYAVKDKEDKEVDSEARPMKDETFG
EYRSLESDADEKRSDSQPSLCGESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPVT
HGNESSGPASPVNAVPPPPIAPSMSSILNRPS
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagcatcggtggacgggctatagggggccgtgctcccccgccctcccc
ctgatcctcctcctcctcctccctctgtccttcctctcctccatgcctccgttcgctcag
ggagccatccacatccccaaagactataaagtgcataaaatgttacagcctccgctcctg
acaaagatgccgacatcgtacacagccttttctcttgaggacatctatctgccatgtgag
gcctctggtaacccgacacccactttccgctggatgaaggatggcaagttgttcgggtcg
gagcataatgagtccgggacgttgtacgccgaagaggaggagcccctggagttgtacgaa
ggcaaataccgctgctttgcctccaacaccctggggaccgccatgacacaaaccatacag
gtcatcgtagaagctcaaccagttatggccaaacaacagaaaatacatttgagagccttc
gagggcgagagcatggtcctgacctgccgccctccgcagagctcagatcctccgctcatc
cactggatggacaagaagatggtgcacatcaagcagagtgagagagtgatggtcggccag
gatgggaacttgtacttttctgatcttctaaagagcgacaccagagacgactacacctgc
aacgcccagtatacagcagccaggaccgtcctccctgacactcccatcaggctcactgtc
atgcccagtaatgatgtcagtcaggtcagagttccccgcctcttccgtcccaccggcacc
cacaccaccatcatggccctcagggagaacagcgtcaccctcgaatgtatccccacaggc
ctacccactccggtggtcaaatggaaaaagaaggacggtcacatgcatgaaacgagcggg
aaactggaggcccatgaccgctggcttcacttcgagagcatcacccagaatgacgacggg
gagtacgagtgcacagcctccaacaatgtaggctccgtgtcacacgccttcactctcact
gtggaagctgctccgtactgggtgaaggagcctcagaacctgctgtactctcccggggaa
actgtgcgactggagtgccaggctgaaggcatcccgacccccgccatcacctggagcatc
aacggtcagccagtcacagaggtggatgctgatcctcgtcggagcatagcagagggcgtg
ttgatactgagggatgttgagtttgctgacaccgctgtgtatcagtgtgaggccaccaac
aaacacggcgccatcctcctcaacacctacctttacgtcgtagagctcccgcctcagatc
ctgtcctctgacggagtggtgtacagagtcactgagggcggagacgtcatgctgcactgt
gaatccttcggctcgccacgacctcacgtcacatgggagggtggggacaagctccccctg
ctgtcggaccctcgtgtctccctgctgaccaacgggaccatcgagctgtcgggggccagt
cacgatgacaccggagagtacacctgctccatcaaacactccaacatctccatctctgct
cacctggaagtcttcaatcgaacacagatactgacggagccgcagcacttgcgcacgctc
agaggaaccaacgctctgctggactgtgacttctacaaagaccctcagctgctgcagtac
cggatcatctggagcaaagacggactggagctgcaggaatcgtcaccagatgacaagtac
actatctttgagaatggcaccttgaaagtgacaaacgtccacccagaggacaacggggtg
tattcctgcgaggtcaaaactgacctggaccgtgtgaaggccagtggctccatcactgtc
gtagcgcggccggatcctcccaaagatctgtttctgtctgatatcgaggaccacagcctc
actctcagctggatcccaggacactcacacaacagccccatcatagagttcatcgtggag
gcccgggaggagcagcactccgaggaggggcagtggaagtgggaggagtggaagaaagtg
tccggggagttcaaccacttggagctgaccctccacccctactgcacctaccgcttcagg
gtcatcgccatcaacgagatcggcaacagcgaccctagcaagccctcagagcaccgcagc
acgccgccagctgtccctgacaaaaaccccactggtgtgcgcagtgagtccatagaccca
aagactctgatcattacctgggatgagatggacaagcgtttgcataacggccagggcttc
cagtacaaggtgtattggcggcaggctgggggggcggatgtccgctggaacaccgccgac
gtacagtctccgccattcatggtaaacaacacaggaacgtacacgccgtttgagatcaaa
gtccaggctgtcaactcacttggagcaggaccgccaccgcggcctgagatcggacactct
ggagaggacgtgcctgaagaagctcccactggagtcacaacaactgtgatcaacagcacc
gtcagagtcaagtggaacgaagccaagaatgtccgaggtctgctgctgggatacaagatc
tacatcaggaggatgggacctcatgggggtcggttgcggaggtctctcggcaaagtgcac
cacgagaaagaggacagatcagagcgtggcaaggacagagacagggggagtcgggtggtg
gtggtccacggcatgaagacatcagaggaagtgacggggctgcagctgtattctcagtat
gagctgtctgttgctgcctttaacagcaaaggaggggggcctcattccccgccgcaccac
ttcagcaccccggagggagcacctggtcctcctgcatcgttgacatttgacagtccttca
gagaaatcgctgatcctctactggacccctccagttgaacccaacggcgtcctgctggga
tacatggtgcagtatcaagaggaggtggagagcagagacagcctgctgcagatggagatc
atcagcgatcccagtgtgacacacattatactggactctctggaccccagcagctactac
atcttcaaagtgattgcacgcaccgccgccggagatggacctcccatcacacggaggggc
gccaccctgctggacggagttcctccgtccaacatcagcatcatctccagtaacacgtca
ctcaacctgagctgggtgcccggagagcgggacaggaaccacggcttcatcatccgctac
atgaggaagagtctcggcgctaagtgggaggagtcagaggtggtgaactccacgcagggt
ttctattcgctgaaaggcctccaaccaggatctcagtaccacctgatgatcaagcacgaa
aacgacaccatgtgggaagatgtgaagtggaccatgggaccagtgccgtcagagatgccc
ggaggcttcgccacccagggttggttgataggactcatcagcgctatcgtgctgttggtg
ctgattctgctcatcctctgccttatcaaacgcagcaagggcggcaaatacgcagtgaag
gacaaagaggacaaggaggtggactctgaagctcggccgatgaaagatgagaccttcgga
gagtacagatctctggagagtgacgcagatgagaagcgctcagacagccagccgtctctg
tgcggggagagcaagctgggcagcgacgactctctggctgaatacggggacagcgtggac
atccagttcaacgaggacggctcgttcatcggccagtacagtggccgggggcccgtcacc
cacggcaacgagagctctggtcccgcctctcccgtcaacgcagtcccgcctccacccatc
gctccatccatgtcgagcatcctgaaccggcccagctag
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