KEGG   Epinephelus lanceolatus (giant grouper): 117258943
Entry
117258943         CDS       T07331                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117258943 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ely03041]
    117258943 (bcas2)
   03400 DNA repair and recombination proteins [BR:ely03400]
    117258943 (bcas2)
Spliceosome [BR:ely03041]
 Complex B
  Other components
   Prp19 complex
    117258943 (bcas2)
 Complex C
   Prp19-CDC5 complex
    117258943 (bcas2)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    117258943 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile THOC7 RRP36 Cep57_CLD DUF8429
Other DBs
NCBI-GeneID: 117258943
NCBI-ProteinID: XP_033486087
LinkDB
Position
8:38633929..38644171
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSA
FETEIMKNEFERLAARQPMDLLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNDNLAFMIEMAQKELQKFRKQIQDLNWQRKNDQLAGGGKLRE
LESNWVSLVSKNYEIERAIVQLENEITQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccggaacggcttcagtagctggtgaagtgttcgtcgatgctctgccgtactttgac
caaggttacgatgcagcaggtgtccgggaagcggctgcagcgttggtggaggaggagacc
agaagataccgacctaccaagaactacctgagctacttgccgacaccggacttctctgct
tttgagacggaaattatgaagaatgaatttgagcggctggcggctcggcagcctatggat
ctcctgagcatgaagagatatgagctgccagcaccctcatcaggacagaagaatgacatc
acagcatggcaggagtgtgtgaacaactcgatggctcagctagagcaccaggcggtccga
attgagaacctggagctcatgtcgcagtatggaaccaacgcatggaaagtctacaacgat
aacctcgccttcatgattgagatggctcaaaaggaacttcagaaattcaggaagcaaatt
caagatttaaactggcagcgtaagaatgatcagttagcaggaggaggcaaactgcgagag
ctggagtcaaactgggtgtctctggtcagtaagaactacgagatcgagcgagccatcgtc
cagctggagaacgaaataactcagctcagacaacagcagggggacgagaataaggagaac
atccgacaggacttctaa

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