Epinephelus lanceolatus (giant grouper): 117258948
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Entry
117258948 CDS
T07331
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117258948 (calcoco1a)
04131 Membrane trafficking [BR:
ely04131
]
117258948 (calcoco1a)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
117258948 (calcoco1a)
Membrane trafficking [BR:
ely04131
]
Autophagy
ER-phagy
ER-phagy recepters
117258948 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
PUMA_CC
CEP15-like
Motif
Other DBs
NCBI-GeneID:
117258948
NCBI-ProteinID:
XP_033486095
LinkDB
All DBs
Position
8:25253217..25268155
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AA seq
652 aa
AA seq
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MEKAWLVEFRNVGCSYFPQSRVDCHYTLSSQHNWASNDWIGLFKVGWSSVKDYHTFVWAL
APADYQEGTDVNCCVHFQASYLPKASSEEYEFAYIDAKGEVCSRSSKFTFCAPKPLEDLV
TLEEEPHGEEGGTDMLLVVPRAELLQSRLQECLRERAELLQALEAANRQREKEKEEYRRA
RDAWDRRRKEIESDITRLQGELKHSREKIHEMEMEQKEQQAFGESLAQEKSALLDAREAS
EMRIKELEEDIKTLTQRTVERETELERMKERAKRAGAQRKEEENERKSLQTKLEQTEGEL
RSLSKEFQGLRNSLAQRDTSVLQLQNSITTLTQKLTTAHRKEAENEATLKEMRALRESLN
TTERAAEGLKNDLSAMVAQRDHGQAELHQARLQAAQLTLQLADSSLALREGRARWAQERQ
TLQRSAEKDQEHLEKLNTEMQRMEERLQEETMERVKLDVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLHAEKQELMEYICQLEQKMGTAASAKWSAAPSASTGRPGSALSDS
EDENPEALQPLRPPRPLGHYSLCEQGQPDSLLLATPPPSPREVERSAVVINQPAPLSSPH
QADADTLAHSSDSEEESDTLQCGRHSSGEETALLLPEHTDTVLSDLADTSLW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggcttggctggtggagttcagaaacgtgggctgcagttacttccctcagagc
agagtcgactgccactacacactgagctcacagcacaactgggccagcaatgactggata
gggctcttcaaggtgggatggtcgtcagtgaaggactaccacacatttgtttgggcattg
gccccggccgactatcaagagggcacagatgtcaactgctgtgtgcacttccaggcctcc
tacctacccaaggccagctcagaagagtatgagtttgcatatatcgatgctaagggggaa
gtgtgctcccgcagctctaaatttactttctgcgctccaaagccacttgaggatctggtg
acccttgaggaggagccccatggagaggaaggaggcacagatatgttgctggtagtgccc
agggccgaactgctgcagagtcgactgcaggaatgtctgcgagagcgcgctgagctgctg
caggcgctggaggcagcaaacaggcagagggagaaagagaaggaggagtacaggagggcg
agggacgcctgggacaggagacgcaaagaaatagaaagtgatatcaccagactgcaagga
gagctgaagcacagtcgagaaaagattcacgagatggagatggagcagaaggagcagcag
gcgtttggagaatcactagcccaggagaaaagtgctttattggatgcgagggaggcgagt
gaaatgcgaatcaaagagctggaggaggatatcaaaaccctgactcagagaactgtggag
agagagacagagttggaaaggatgaaggaaagagcaaagagggcaggtgctcagagaaaa
gaggaggagaatgaaagaaagagcctgcagaccaaactggaacagacagaaggtgaactt
cgaagtctgtccaaggagtttcagggcctgaggaattcactggcccagagagacacaagt
gtcctgcagctccaaaacagcatcaccaccctcacccagaagctcaccacagcccacagg
aaagaggcggagaacgaggccacactaaaggagatgcgggccctacgggaaagtctgaac
acgacagagcgtgctgcagagggcttgaagaatgatctgagtgccatggtggcccagagg
gaccacggccaggctgagttgcatcaggctcgtctgcaggctgcccagctcaccctgcag
cttgcagattccagtctggccctgagagagggaagagcccgctgggcccaggagaggcag
accctgcagcgctctgctgagaaggaccaggagcatctggagaaactcaacacagagatg
cagaggatggaagagaggcttcaggaggagacaatggagagagtgaagctggacgtcgag
ctcgggagagaaaaggattgtaaccgggttcagctgagtgaaacccgcagggagctccag
gagctgaaggccagtctgagggtcgcccaaaaagagaaggagcagctacatgcagagaaa
caggagttgatggagtacatctgtcagctggagcagaagatgggaacagcggccagtgcc
aagtggagcgctgccccgagtgcctctacagggcggcccggcagtgcgttatctgactct
gaggatgagaacccagaggctttgcagcccctccgtccaccaagacctctggggcactac
agcctgtgtgagcagggccagccggactccttgctccttgccacccctcctccctccccc
agggaagtggagaggagcgcagtggtcatcaaccagccagccccgctctcctcgccccac
caggctgacgctgacactctggcgcacagctctgattcggaggaggaatctgatacactt
cagtgtggaaggcacagctctggagaggaaacagcacttttgctgcctgagcacacggac
actgttctcagtgatctggccgacacctcactatggtaa
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