Epinephelus lanceolatus (giant grouper): 117259157
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Entry
117259157 CDS
T07331
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04142
Lysosome
ely04144
Endocytosis
ely05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117259157
04142 Lysosome
117259157
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117259157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117259157
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117259157
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117259157
Exosome [BR:
ely04147
]
Exosomal proteins
Proteins found in most exosomes
117259157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117259157
NCBI-ProteinID:
XP_033486292
LinkDB
All DBs
Position
9:complement(36401881..36429328)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPADAWKEGQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPS
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaatctgggaatc
aacccagccaacattggattcagcactctaaccatggagtccgacaagttcatctgtata
agagagaaagtgggtgagcaggcacaggtcgtcatcatcgatatggctgaccccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gctctcaaagacgctgcaaagaccctgcagatcttcaacattgagatgaagagcaagatg
aaggctcacacaatgacagatgacgtgaccttctggaaatggatctccctcaacactgtt
gccctggtcacagacaacgcagtctaccattggagcatggagggagattctcagccaatc
aaagtttttgaccgtcactccagcctggcaggctgccagatcatcaactaccgcactgac
gccaaacagaagtggttgctgctcattggcatttcagcgcagcaaaatcgtgttgtcgga
gccatgcagctgtactcagtggacagaaaggtgtctcagcccatcgaggggcatgccgca
ggctttgcacagttcaagatggagggcaacactgaggagtcaaccctgttctgctttgct
gtgcgaggacaggcaggaggaaagctgcatatcattgaagtggggactccgccgactggg
aaccagccatttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgac
ttcccagttgccatgcagatcagttccaagcaagatgtagtttttctcattaccaaatat
ggctacatccacctgtatgacctggagactgggacttgtatctacatgaacaggatcagt
ggggagactatttttgtgactgccccccatgagcctactgcgggtatcattggagtcaac
aggaaaggacaggtgttgtcggtgtgcgtggaagaggagaacatcattccctacatcacc
aatgtgctccagaacccagacctggctctccgcatggctgtccgcaacaacctggctggt
gctgaggagctctttgcccgcaagttcaacaccctctttgcagcggggaattactcagaa
gctgccaaggtggcggccaacgcacccaagggtatcctgcgcaccccagacaccatccgt
cggttccagagtgttccagcccaaccaggccagacgtctcctttgctccaatactttggc
atcttgctggaccaaggccaactgaacaagtttgagtctttggagctgtgcaggcctgtc
ctccagcagggacgcaaacagctgctcgagaaatggttaaaagaggacaagctggagtgc
tctgaggagcttggagatttggtgaagtctgtagatcctactcttgccctcagtgtctac
ctcagagccaacgtccccaataaggtcattcagtgctttgcagagactggacagttccag
aagattgtcctctacgccaagaaggtgggctacactccagactggatcttcctgctaaga
aacgtaatgcggatcagtccagagcagggtcttcagttctcccagatgctggttcaggat
gaggagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatc
cagcagtgcacatccttcctactagatgccctgaagaataacagacccatggagggtcca
ctgcagacacgcctgctggaaatgaatttggtgcacgcaccacaggttgcagacgccatt
ctgggcaatcagatgttcacccattatgatcgtgcccatgtggcacagctgtgtgagaag
gccggtctcctgcagagggcactggagcattacaccgacctgtatgatattaagcgcgct
gtggtacacacacaccttctcaacccagagtggttggtgaatttctttggctccttgtca
gtggaggattctctggagtgtctgagggccatgctgtctgcaaacatccgccagaatctg
cagatctgtgtccaggttgcctctaagtaccatgagcagctcaccactcagtctctcact
gaactttttgagtcattcaagagctttgaaggtttgttctactttttgggttccattgtg
aacttcagccaggatccagaggtccactttaaatatatccaggcggcctgcaagacaggc
cagatcaaagaggtggagagaatctgccgagagagtaactgctatgaccctgaacgtgtg
aagaacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgac
cgctttgattttgtccatgatctggtcctgtacctgtaccgcaacagcctgcagaaatac
attgaaatctacgtgcagaaggtgaacccaagccgtctgccagtagtcattggagggtta
ctggatgtggactgtgctgaggatgtgattaagaacctgattatggtggttagagggcag
ttctctacagatgaattggtggctgaggtggagaaaagaaatcgactgaagctgctgctg
ccttggttagaggcccgtattcatgaaggttgtgaggagcctgccacccacaacgccctg
gccaagatctacatcgacagcaacaacaaccctgagcgtttcctgagggagaacccctac
tacgatagccgcgtggtgggcaagtactgtgagaagagagacccacacctggcctgtgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactccctg
ttcaagagtctgtcccgctaccttgtccgtcgcaagaaccctgagctgtgggcgagcgtg
ctgctggagaccaacaattacagaagaccactcatcgaccaggttgtccaaacagccttg
tctgagacccaggatccagaggaggtgtctgttacagtcaaggccttcatgaccgccgat
cttcccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagc
gagcacagaaacctccagaatctgctaatcctgacagccattaaagctgatcggacacgt
gttatggagtacatcaatcgtctggacaactacgatgccccagacattgcgaacatcgcc
atcagcaatgagctgtttgaggaggcctttgctatttttaggaaatttgatgtgaacacc
tctgctgtgcaggtcctcattgagcacattggtaacctggacagagcctatgagtttgct
gagcgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcagaagggc
ctggtcaaagaagccattgactcttacatcaaagccgatgacccctctgcttacatggag
gtgggacaagctgcagcccaaagcggaaactgggaggacctggtgaagtttctgcagatg
gcccgtaagaaggcccgcgagtcgtacgttgaaacagagttgatctttgctctggctaag
accaaccgcctggctgagctggaggagttcatcaacggacccaataatgctcacattcag
caagtgggtgaccgttgctatgatgacaagatgtacgaggcagccaaattgctttacaac
aacgtgtccaactttggccgtctggcctccactctggtgcacctgggcgagtaccaggca
gctgtggatggagctcgcaaggccaacagcactcgcacctggaaggaggtgtgttttgcg
tgtgtagatgggaaagagttccgtcttgcccagatgtgtggcctgcatattgtcgtccac
gccgatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgttggaggccgccctgggtctggagcgtgctcacatgggcatgttcactgag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacttggagctcttc
tggtctcgcgtcaacattccaaaggttctcagggcagccgagcaggcccacctctggggg
gagctggtgttcctctatgacaagtacgaagagtatgacaacgccatcatcaccatgatg
aaccacccagctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggct
aatgtggagttgtactacaaggccatccagttttatctggagttcaaaccattgttactg
aacgacctgctcatcgtcctctctccaaggctggaccacacacgtgctgtcaacttcttc
agcaaggtgaagcagctgcctctggttaaaccatacctaaggtctgtccagaatcacaac
aacaagtcagtaaatgaggcactcaacaacctcttcatcattgaggaagactatgcggca
ctgcgcacttctatcgatgcttatgacaactttgacaacatctcgctggcccagggcctg
gagaagcacgagttgattgagtttaggaggatcgcagcctacctgttcaagggcaacaac
cgctggaaacagagtgtcgagctctgcaagaaggacaagctctataaggatgccatgcag
tacgcatcagagtccaaagatatcgagctggccgaggagctcctggcttggttcctgaat
gaggacaagaaggagtgttttgccgcctgcctattcacctgctacgacctgctgcggcca
gatgtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccatatttc
atccaggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctctgagtcactgaggaaacaggaggagcaggctaccgagtctcaacccatt
gtttacggcacaccccagctcatgctcacagcagggcccaacgtggccgtgcctccccag
cagccctacggctacggctacacagcagcgccaggctacggccagcccccacagcccagc
ttcggttatggcatgtga
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integrated database retrieval system
