Epinephelus lanceolatus (giant grouper): 117259300
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Entry
117259300 CDS
T07331
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117259300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117259300
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117259300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_4
Ank_5
Ank_3
YVC1_C
T4SS_AnkD
Motif
Other DBs
NCBI-GeneID:
117259300
NCBI-ProteinID:
XP_033486454
LinkDB
All DBs
Position
4:complement(11893987..11904220)
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AA seq
767 aa
AA seq
DB search
MDDGQPTDKEEPTINQEEEGDGLDWLLRTDSSEIIPAPMDTNVLLTRECDTTDDSINNKE
FTRERVFEAASQGDTAELVGLLDYLRVTKKKLTSPEFTDETNGKTALLKALMNLKDGKND
TIEVLLDIAEKTGDLENFINASYQDPCYNGQTALHIAIERRSFNHVKLLVQKGADVQAKA
NGKFFQRNAGLGFYFGELPLSLAACTNQPDVVAFLMENPYTRADVADKDLQGNTVLHALV
VIADNTDENTEMIAKMYDEILTQHSRLEKKTIVQLEEIENDKGLTPLKLAAKLGKIGLFK
HMLHREFVDEEMRPLSRKFTEWVYGPVHSSLYDLSSIDTNEKNSVLEIVVFSSEIPNRPE
MLQIEPLRSLLQNKWDRFASKLFLMNFLVYLAYLIIFTAVAFYRKEGQPPFPIDNVPLDY
IRCIGEVISVLGAIWFFYKAITIFKRNPPTFKALYTTGFCDILFFLQAALILVCTVLYFC
GRKEYVGLLVLALALAWINVLYYSRGSKQMGMYSVMMERIILGDLLHFLCVYGVLLFGFS
AAVVAVIRDSPPACRKVRNGTLPHGSSPVVKTLKCKKSSYNDIRFATLEMFKFTIGMGDL
QFTDHVQYKEVFYILLISYIVITYILLLNMLIALMGYTVERVSKQIENIWNLQRASTILD
MEGTLPRCLVNKLHSGMSKMVRLKNEGDESRQFFRVEEINWKKWRSDVGVVQEEDPGESM
MKPLHREHTPRSRWHINPLLKRIHARHHQPQLSSVPDAQHNIKIQIH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggacgatggacagccaacagacaaagaggagcctacaataaaccaagaggaagagggg
gatggtctggattggctcctcagaacagacagctcagagataattcctgcgccgatggat
accaacgtcttattaacaagagaatgtgatactactgatgacagcattaacaataaagaa
ttcaccagggagagagtctttgaagcagcatctcagggagacacagctgaacttgttggc
ctgcttgactacctacgagttactaaaaagaaacttaccagcccagaattcacagatgaa
actaatgggaagacggcgctcctgaaagcattgatgaatctgaaagatggcaaaaatgac
acaatcgaggtcctccttgacatagcggaaaaaactggagacttagaaaatttcatcaac
gcatcttaccaagatccttgttacaatggtcagacagcactgcacattgccattgagaga
aggagcttcaaccatgtgaaactgctggtccagaaaggagcagatgtgcaagccaaagcc
aatgggaagttcttccagcgtaatgcaggactgggcttttattttggagagcttcctctg
tcactagctgcttgcaccaaccagcctgatgtcgtggccttcctcatggaaaacccttac
acaagagccgacgtggctgacaaggacttgcaaggaaacactgtcttgcatgccttggtg
gtcatagcagacaatacggatgaaaacacagaaatgattgcaaagatgtatgatgagatc
cttactcagcacagcagacttgagaagaaaacaatagtccagttggaagagattgaaaat
gataaggggctgactcctctgaagttggctgccaagctgggcaagattgggctcttcaag
cacatgttacaccgtgaatttgtggatgaggagatgaggccactgtccaggaagttcaca
gaatgggtctatggaccagttcactcttcactttatgacctgagttccattgacaccaat
gaaaaaaactctgtgttggagatagtcgtcttcagtagtgaaattccaaatcgacctgag
atgctccagattgagcctctgcgcagtcttctccagaataagtgggacaggtttgcttcc
aaattatttttgatgaatttcctggtttacctggcgtacctgatcatcttcaccgctgtg
gccttctacagaaaagaaggacagccaccatttcccattgacaatgtcccgcttgactac
attcgttgcattggcgaggtgatcagtgtccttggagcaatatggtttttctataaagcg
ataactattttcaagaggaaccccccaaccttcaaggctctatacacaactggattctgt
gacattctatttttcctgcaggcagcactcattttggtctgcacagttttgtacttctgt
ggacgaaaagaatacgttggactcctcgtgctcgcactggcccttgcctggatcaatgtt
ctttactactcaagaggctctaaacaaatggggatgtacagtgtcatgatggaaaggata
atcctgggtgacctgttacactttttatgcgtctatggtgtcctgctatttggattttct
gctgctgttgttgctgtcatacgcgactctcctccagcttgtagaaaggtccgcaatggc
acactgccacatggaagcagccctgttgtcaagacattaaagtgcaagaagtcaagttac
aacgatatccgtttcgcaacactggaaatgttcaagttcactattggaatgggagacctg
cagttcactgaccatgttcagtacaaggaagttttctacatcttgctcatctcgtacata
gttatcacctacatcctgctgctcaacatgttgatagctctgatgggctacacagtggaa
agagtctccaaacaaattgaaaacatctggaacctgcagagggcttctaccattttggac
atggaggggaccctgccaaggtgccttgtgaataagctgcactccgggatgtcgaagatg
gtgcgtttaaaaaacgagggggacgagagtcgtcagtttttcagggtagaggaaattaat
tggaaaaagtggaggtcagatgtcggtgttgtccaggaggaggaccctggggaaagcatg
atgaagccactgcaccgtgaacacactcctaggtctcgatggcacataaatccattgttg
aagaggattcacgccagacaccaccagccacagctctccagtgttcccgacgctcagcac
aacatcaaaatacagatccactaa
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