Epinephelus lanceolatus (giant grouper): 117259398
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Entry
117259398 CDS
T07331
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117259398 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117259398 (dhx36)
03012 Translation factors [BR:
ely03012
]
117259398 (dhx36)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117259398 (dhx36)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117259398 (dhx36)
Translation factors [BR:
ely03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117259398 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117259398
NCBI-ProteinID:
XP_033486604
LinkDB
All DBs
Position
9:23013129..23048772
Genome browser
AA seq
1067 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSRERWDRGGGSRGHSSDFDQDRGGGGGQRDRPPPHLK
GREIGLWYARYGAVRKKQADRRSRAVVQMDEAREQHITKLLNSVQNEPGPRRDSRDARPS
TSDSWRAAANSSGHCYFDGDLPEEEKLKVELKSEEEEEEVTPGQKKATHKSQRYFSQAAV
KDEPPDTWDEEEEQEKEEKEKLRRKDKDVEFLFQEVVRDSSLDERLKRDLESKKSDPKYR
EMLKFREKLPSYGKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGMGSMCR
VVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQW
LRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKDLLNLRDDLKVILMSATLNAEKFSKYF
DNCPMIHIPGLTFPVEEFLLEDIVEITRYRSQNQDRRPAWKRGFWQGRHSRPEKEEKEAE
YKESWPCYARTLQGRYSDNTIETLELLDNDDKIDLELILALIRHIVLNEEEGAILVFLPG
WDNISSLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETS
ITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYNG
LRASLLDAYQLPEIMRTPLEELCLQIKILKLGFIAGFLEKALDPPTEKAVNLAIKNLVDL
NALDRSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPILTIAASLSFKDPFFIPLGK
EKMADMRRRTLSRNSKSDHLTIVNAFQGWEEAKQRGARYEREYCWDNFLSANTLQMLHNM
KGQFAEHLMHAGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGV
KVYTQADGKVCIHPKSVNAEETEFNYKWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDI
TIQKDEDQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKICNPAPVDWQNRQSKDC
AVITAIIDLITTQEKPTGNTRGCGRTWASAPRGQHIHFNDDDDDDDD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggcggtggaggtgggagaagaggcaggagaggaggtcgggggcac
agggatgggagcagggagagatgggacagaggaggagggtcgagaggacacagctccgac
ttcgaccaggaccgaggaggaggaggtggacaacgggaccgtcctcctcctcacctgaag
ggacgtgagattggtctgtggtacgcgagatatggagccgtgaggaagaagcaggctgac
cggagatcgcgggcagtggtccagatggatgaggccagggagcagcacattaccaagctg
cttaactctgtccaaaatgagcctggtccaaggagggacagcagggatgcgagaccctcc
acgtctgacagctggcgggcggctgccaatagcagtggtcattgttactttgatggggat
ttgcctgaagaggaaaagctgaaggttgagctcaaatctgaggaagaggaggaagaagtc
actccaggccagaagaaagcaactcacaaatcacaacgttacttctctcaggcagctgtt
aaggatgagcctccagacacgtgggatgaagaagaagagcaggaaaaggaagagaaagag
aaactgagaaggaaggacaaggacgtggagttcttatttcaggaagtagtcagagacagt
tcactggatgagcgtttaaagagagatttggagagcaagaaatcagatccaaagtacaga
gaaatgctgaaattcagggaaaagctaccgtcttatgggaaaaaagaggagctggtggag
ctgatcaactcgaaccgtgtcctggtggtgagtggggaaacagggtgtggaaagaccact
caggtcacccagttcatcctagatgactacatcaatagaggcatgggctccatgtgtcgt
gtggtgtgcacgcagcctcgtcgcatcagtgccatctcggtagcggagcgtgtagcagca
gagagggcagaaagtgttgggaatggaaattcttgtggttaccaaatccgcctgcagagc
cggttaccacggagacaaggttcggtcctgtactgtacaacaggcattattcttcagtgg
cttcgctcagacccattgttgtctagtatcagccacctggtgctggacgagatccatgag
aggaacctgcagtctgacgtcttgctcgtcatagtgaaggacctactcaacctccgagat
gatctcaaggtcatcctcatgagtgccaccctcaatgcagaaaagttttctaaatatttt
gacaactgtccaatgatccacatccctggtttgaccttcccagtagaagagttcctactt
gaggacattgtggaaataaccaggtaccgttctcagaatcaggaccgtcgccccgcatgg
aagagaggtttttggcaagggcgccactccagacctgagaaggaggagaaggaggctgag
tacaaggaaagctggccttgttacgcacgcacactgcagggcagatactccgacaacacg
attgagactctggagctgttggacaatgatgacaagattgacctggagctgattctggca
ctgatccgccatattgttctcaatgaggaggaaggagcaatcttggtcttcctgcctggt
tgggacaacatcagcagtctcaatgacctgctcacggctcagcagatgttccgatcagac
cggttcgttatcatcccgttgcactccctcatgccgaccgttaatcagacgcaggtgttc
aaaaggcctcctcctggagttagaaagattgtgattgctaccaatatagctgagaccagc
atcaccatagatgacgttgtttatgtgatagatggagggaagattaaggagaccaacttt
gacaccaacaacaacatcagcacgatgacagcagagtgggttagcctggccaatgccaaa
cagaggaaaggacgtgccggcagagtgtgtccagggaagtgctatcatctgtacaatggt
ctcagggccagcctgctggatgcctatcaattacctgaaatcatgaggacaccactggag
gagctctgcttgcaaatcaagatactgaagctcgggtttatcgctgggttcctggagaaa
gctcttgaccctcccactgaaaaggccgtcaacctagctatcaagaacctcgtagacctg
aacgccctggaccgttcagagaatctgacagcgctgggtttccacctggctcgcctgcct
gtggagcctcacattggcaaactcatcctgtttggagctctgctgggctgcctcgacccc
atactcaccattgctgcttcgctcagcttcaaagaccctttcttcatacccctgggcaaa
gagaagatggcagacatgaggagaaggaccctctccagaaactccaagagtgaccacctc
actattgtcaatgccttccagggctgggaggaagcgaaacagcgtggtgccaggtatgag
agggagtactgctgggacaacttcctgtctgccaatacactccagatgctgcacaatatg
aagggccagtttgctgagcatctaatgcatgcaggctttgtcagcagcaaggaccccaaa
gaccccaaatctaacgtcaactcagacaatgaaaagttgatcaaggcggtgattgttgcc
ggtctttacccgaaggtggccatgatcagaccgtcccacagcaaaaagaggccgggggtt
aaggtatacacccaggctgatggaaaggtgtgtatccacccgaaatcagtcaacgccgaa
gagactgagttcaactacaagtggctcatctaccaccttaagatgaggacgagcagtatc
ttcctgtacgattgcaccgaggtgtccccgttctcgctgctgttcttcggaggagatatc
acgatccagaaagacgaggaccaggaaaccatcgctgtggaccagtggatcgtcttcaga
tccccagcacgcattgctcaccttgtcaagagtttaaagaaagagctggattctctgctg
gaggagaaaatctgtaaccctgctcctgtggactggcaaaaccgccagtccaaagactgt
gctgtcataacagccatcattgacctcatcaccacccaggagaagcctacaggcaacact
cggggctgcggcaggacgtgggcgtctgccccgagaggacaacacattcacttcaacgac
gatgacgacgacgacgatgattag
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