Epinephelus lanceolatus (giant grouper): 117259554
Help
Entry
117259554 CDS
T07331
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117259554 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117259554 (rabgef1l)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117259554 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
117259554 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Usp38-like_N
Motif
Other DBs
NCBI-GeneID:
117259554
NCBI-ProteinID:
XP_033486827
LinkDB
All DBs
Position
9:complement(24035361..24042096)
Genome browser
AA seq
503 aa
AA seq
DB search
MMSQRRGIHLDQSELLCKKGCGFYGNTGWQGLCSKCWREENQREKQRQIQEDWALAERLQ
REEEEAYASRHQKAQSQHTITPFSRFEERKTKEKSSKVNTVTKFFTPSTKTPPKKDAHFD
AHSSPSPSSSTSRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMGADE
LSECVQDFYQNLSDRLHTQFKGSSDHVESVMDEVEKYMMTRLYKEVFCPETTDDEKKDLA
IQKRIRALHWVTIEMLCVPVDEEIAEVSDSVVKAITDVIEMDSKCVPKEKLACITRCSKH
IFNAIKISKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRYSNPSRLMTGEDGYYFT
NLCCAVAFIEKLDGQSLNLSSEEFELYMSGQASPHWPPSSEASSCSPGSAALSQVHKRLD
LLTGLGERQERVMEKARQLESDLIDWTDEVEQKVQSVLESFPPETQNPPAPSASGTTSAS
AIDSDNVENEHLPPPLQPQVFAG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtgggatccatctggaccaatcagagctgctttgcaaaaaagga
tgtggtttttatggcaacactggctggcagggcctgtgctcaaagtgctggcgggaggaa
aatcaacgagaaaagcaaaggcagatccaagaagactgggcacttgctgaaaggctgcag
agagaggaagaggaagcttatgcaagcagacatcagaaagcccaatcgcaacataccatc
acacccttcagccggtttgaggaaagaaaaactaaagagaagtccagcaaagtcaacaca
gtcacaaagttttttactccttccacaaaaacaccaccgaaaaaagatgctcatttcgat
gctcactccagcccaagcccgagctcctctacaagccggcattcctctgtggacagtgac
catgcaacgcgagagttcattgatttcctcaagcctctgaaatcaggcagggagatcttc
aaacagtgcagggccttcactgagagcatggtctataagcgggacatgggtgctgatgag
ctgtcagagtgtgtgcaggacttctaccagaacctctcagaccgtctccacacccagttt
aaaggttcatcagatcacgtagagagtgttatggatgaagtagagaagtacatgatgact
cgtctctacaaagaagtgttctgtcctgagaccacagacgatgagaagaaagatctggcc
attcagaagagaatcagagccttgcattgggtcaccattgagatgctgtgtgttcccgta
gatgaggagattgctgaggtgtcggacagtgtagtcaaagccatcacagatgtgattgaa
atggattcaaagtgtgtgcccaaggagaagctggcgtgcatcactcgttgcagcaagcac
atcttcaacgccatcaaaatcagcaagaaagaggcggcatctgcagatgacttccttccc
acactcatctacatcgtgctgaaagcgaaccctccgagactgcagtcgaacatccagtat
atcacacgctacagcaaccccagcagactgatgactggagaggatggttactacttcact
aatctgtgctgtgcggtggccttcattgagaagctggatggccagtctctgaatttaagc
tctgaggagtttgagctctacatgtctggtcaggcatccccccactggccaccatccagc
gaagcttcctcctgttctccaggcagcgcggctctcagtcaggtccacaaacggttggat
ctgctaacagggctcggggaaaggcaggagcgggtcatggagaaggctcgccagctggag
agcgacctcattgactggacggacgaggtggagcagaaggtgcagagcgtcctggagagc
tttccaccagagacacaaaaccctcctgcaccctcagctagtgggacaacttctgcatca
gcaatagactctgataacgttgagaatgagcacctgcctccaccactgcagccacaagtg
tttgctggttga
DBGET
integrated database retrieval system
