Epinephelus lanceolatus (giant grouper): 117259574
Help
Entry
117259574 CDS
T07331
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117259574 (dhx34)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117259574 (dhx34)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117259574 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
117259574
NCBI-ProteinID:
XP_033486874
LinkDB
All DBs
Position
9:18023955..18034742
Genome browser
AA seq
1152 aa
AA seq
DB search
MDSDQRRDSRSWDWDSPQCRAQLDEVFFRPHDYIQAGSPEHKEFWAFFDRFQRFKTKRDM
SGSGAKQDREEGKDKRKTGTGKVDLGLPKEYDARYRINVSVCTRDVEERLGKSEHRGRQR
SSGPGSQEISDCRLALLHFLDFSQRQSFGKLAKLRREQKNLPIFQYRDRIVELVRRHPVV
VVAGDTGCGKSTQVPQYLLSAGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIR
FETTRTLATKLLFLTEGLLLRQIQQDTTLAQYQVLIVDEVHERHLHCDFLLGVLRSLLAD
NPHLRLILMSATINIKLFSDYFNSAPVLQVPGRLFPIQVIYQPIPPEEQSSRSEKMDPRP
YLRILQGINQRYPPEERGDLLIFLSGVAEISTIQEACQIYATHTRRWIVLPLHSTLSLAQ
QDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWIS
RASSEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMCLGDPL
SFVFIDPPPAASIQTAVTYLKEQGALDSRAELTSIGSLLAQLPVDVVIGKMLVLGCLFNL
VEPVLTVAAALSVQSPFLRSSQHNPDCATARQPLHSNHGDPFTLLNTFNAWVEVKGERGG
GSRKWCRRRGLEEQRLYEMVNLRRQFKDLLRSHGLLESESSAPSSGDREKRRERLTERRK
LHQLKRDHEQQESSRRKVLRLNEGQDGEFSSGSDTEGVSRDKRDKGGSGQNMDIQEVKFK
LRHNVSELQDAANVSQDMSSRQQALIKLLLCRGLFPQLAVPDEHNSNRKDSDQVFHTRNK
QGVVIHPTSVFASDPEVLQVPEENTREMGPDRRDSSKHQLLAFVTLLETNKPYLSNCVRV
PALQALLLVANSIDSNADCTRLVVDGWLELELREPEEALKVLSTALTLRAEWERLLLAQL
GQSTVKGAAVQGVSRKTMEKLSEGLVRFLLYTEVSYSLRRLTAFQTQNLYIGPQSESELS
HTQAPFVNSLFPGVEVKPDPIKGGLRVTNFFSYNCLADSKDLYSECLRTFWSCPNCDLYM
PLTPLERMQHEASCRPAGEQQQPEEEPEGGKASSSSVSSLTRVYHCDVCDEDLTLTSTEI
LKHKRQHMCSAK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaccagaggagagacagccgcagttgggactgggacagcccgcagtgccga
gcccagctggacgaggtctttttccgcccgcatgactacatccaggccggcagcccggag
cacaaagagttttgggctttctttgaccgcttccagaggttcaaaacaaagagggacatg
tctggctcaggagcaaaacaggacagagaagagggtaaagacaagagaaagactggcact
ggaaaggtagaccttggccttcctaaagagtatgatgctcgttaccggattaatgtatct
gtttgcaccagagatgtcgaggagcgcctcgggaagtcagagcacagaggcaggcagaga
tcgtcgggtccaggcagccaggagatctcagactgccgcctggctctcctgcatttcctg
gacttcagccagaggcagagttttggaaagctggccaagcttcgccgggagcaaaagaac
ctgcccatcttccagtatcgggacaggatagtggagctggtgcggcgtcaccctgtggtt
gtggtggcaggggacacaggctgcggaaaatccacacaagtacctcagtatcttctgtca
gctggcttcagccacatagcctgcactcagcctcgacgtattgcctgtatatccctcgca
aagagggtcagctttgagagtctcaatcagtacggctcaaaggtaggttaccagatccgc
tttgagaccacccggacgctggccaccaaactgctgttcctgactgaggggctgctgctc
cgacagatccaacaggacacgacgctggctcagtatcaggtgctgatcgttgatgaggtc
catgagcgacatcttcactgtgactttcttcttggggtcctgcgttctctgctggccgac
aacccacacctgcgtctcattctcatgtcagccacaatcaacatcaagcttttctctgac
tatttcaatagcgctcctgtgctgcaggtgccaggcaggttgtttcctatacaggtgata
taccagcccattccacccgaggagcagtcctcacgttcagagaagatggatcccagacca
tatctgcgcatcctgcagggcatcaatcaacgctaccctccagaggaacgcggcgacctg
ctcatcttccttagtggtgtggcagaaatctccaccatccaggaggcctgtcaaatttat
gccacacatacacgtcgctggattgtcttaccgctgcacagcaccctctcactggcccag
caggataaggtgtttgacattgctcctccaggggtgagaaagtgcatcatctcaaccaat
attgctgagacctcagttacaatagatggagtgcgctttgttgtagactcagggaaggta
aaggaaatgagttttgatcctaaggccaagatgcaacgtctgcaggagttctggatcagc
cgagccagctctgagcagaggaaaggtcgagccggtcgtacaggtccaggagtgtgttac
cgcctgtacgctgagtctgactacgatgctttcgcaccttatcctgtgcctgaaatccac
agagttgctctggactcccttattcttcagatgaagagcatgtgtcttggagatccactt
tcttttgtcttcattgatccacctccagctgctagtatccagactgcagtcacttatctg
aaagagcagggggcgttagacagtcgtgctgaactgacctccattggtagtttgctggca
cagttgccagtggatgtggtcatagggaagatgctggtgctgggctgtttgtttaacctg
gtggagcctgtattgacagtggcagcagcccttagtgttcaatcacctttcctgcgcagc
tcacagcacaacccagactgtgccactgcccgccagcccctgcacagcaaccatggagac
ccctttaccttactcaacaccttcaatgcctgggtggaggtgaagggagagagaggtggt
ggctcaaggaaatggtgcaggaggagaggcctggaggagcagcgactatatgagatggtc
aacctacgcagacagttcaaggacttgctaaggagccacggcctgctggaatcagagagt
agcgctccctctagtggtgaccgcgagaagcgtagggagaggcttacagagaggaggaag
ctgcatcagctgaagagagatcatgagcagcaggagagcagcagacgtaaagtcttgagg
ctgaatgaagggcaggatggagaattctcctcaggatcagacacagagggggtcagtaga
gacaagagggacaaggggggatcaggacagaacatggacatacaggaggtgaagttcaag
ttgcgtcacaatgtgtcagagctgcaggacgcagccaacgtcagccaggacatgtcctcc
cggcagcaggctttgatcaagctgctgctttgccgaggcctcttcccccagctggcagtg
cctgatgaacacaactccaaccgcaaggactcagaccaggtgtttcatacaaggaataag
cagggagtggtgatccacccaaccagtgtgtttgccagcgacccagaggtgctacaagtg
ccggaggaaaacaccagagaaatggggcctgataggagggacagcagcaaacaccagctg
ctagcctttgtcactctgttggagaccaacaagccatatttgtccaactgtgtgcgggtt
ccagcactgcaagctctgctgctggttgcaaattccattgacagtaatgctgactgtacg
cgtctggtggtggatggctggctggagctggagctgagggagccggaggaggccctgaag
gtgctgtccacagctcttaccctcagggctgaatgggagcgcctcctgttggcccagctg
ggacagagcacagtcaagggagcagcagtccagggagtgtcccgcaaaaccatggagaag
ctgagcgaaggcctggtccgctttctgctctacactgaggtcagttacagcctacggcga
ctcacagctttccagacccagaacctgtacatcggccctcagtctgagtctgagctgtct
catacccaagctccatttgtaaactcactgtttccaggagtcgaggtcaagccggacccg
attaagggaggcctgcgtgtcaccaacttcttcagctacaactgtttggctgactcaaag
gatctttacagtgagtgtttacgcactttctggagctgtcctaactgtgacctctacatg
cctctgactccacttgaacgcatgcagcatgaggcctcctgcagaccagcaggagaacag
cagcagccagaggaagagccagaaggtggaaaggcaagctcatcctcagtgtccagtctc
accagagtttatcactgtgatgtctgtgatgaagacctgaccctcacctccactgagatc
ctcaaacacaaaagacagcacatgtgttctgctaagtaa
DBGET
integrated database retrieval system
